si:dkey-190g11.3 (axial mesoderm): Daniocell

Daniocell

si:dkey-190g11.3 (axial mesoderm)

si:dkey-190g11.3 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
CABZ01079081.1	0.376	ptmab	-0.068
maats1	0.271	hmga1a	-0.065
CU469420.4	0.257	h2afvb	-0.063
edn3b	0.255	hnrnpa0b	-0.059
vsig8a	0.236	si:ch73-1a9.3	-0.057
unc13d	0.235	marcksl1b	-0.055
tyrobp	0.222	cycsb	-0.053
BX323076.1	0.221	srsf3b	-0.053
AL953894.1	0.216	khdrbs1a	-0.052
BX248106.1	0.213	msna	-0.052
si:dkey-72l14.3	0.206	hmgb2b	-0.052
XLOC-017252	0.202	si:ch73-281n10.2	-0.052
LOC110439416	0.200	snrpb	-0.050
si:dkey-184p9.7	0.198	si:ch211-288g17.3	-0.050
zgc:158263	0.196	tma7	-0.050
nipal4	0.196	syncrip	-0.049
LOC101885758	0.195	nucks1a	-0.049
bik	0.194	snrpf	-0.049
AL954694.1	0.193	cirbpa	-0.049
stoml3b	0.190	lrrc59	-0.048
ponzr5	0.186	sec61b	-0.048
ankdd1b	0.185	hspb1	-0.048
zgc:110333	0.185	setb	-0.047
gna15.1	0.184	pfn2l	-0.047
elf3	0.183	pdap1a	-0.047
dnase1l4.2	0.182	ddx39ab	-0.046
zgc:85932	0.180	hnrnpabb	-0.046
cracr2b	0.179	h2afva	-0.046
BX000438.2	0.179	hnrnpa1b	-0.046
fam83e	0.177	asph	-0.046
mal2	0.176	eif5a2	-0.046
si:ch1073-441p17.1	0.176	ilf3b	-0.046
si:ch211-79k12.1	0.175	snrnp70	-0.046
XLOC-000490	0.172	nop58	-0.045
loxa	0.172	snrpd1	-0.045