si:ch211-66i8.3 (axial mesoderm): Daniocell

Daniocell

si:ch211-66i8.3 (axial mesoderm)

si:ch211-66i8.3 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
XLOC-018977	0.439	pabpc1a	-0.031
XLOC-029591	0.321	rpl18a	-0.028
fstl4	0.254	ppp2cb	-0.026
BX005329.2	0.241	cst3	-0.025
LOC108184018	0.238	arfgap2	-0.025
XLOC-026547	0.213	hnrnpl	-0.025
CU896691.3	0.195	ergic2	-0.024
ftr03	0.191	ube2na	-0.024
LOC110440053	0.189	srsf9	-0.024
LOC103910883	0.183	bxdc2	-0.024
LOC110439943	0.183	ddx61	-0.024
LOC110439533	0.178	rps28	-0.023
mtf1	0.178	hnrnpm	-0.023
LOC110439517	0.175	smc4	-0.023
LOC101884310	0.162	pnn	-0.023
rab44	0.159	srpk1a	-0.023
si:dkey-15h8.15	0.157	hnrnpa0a	-0.022
NAT16 (1 of many)	0.156	rhoaa	-0.022
CABZ01043953.1.1	0.154	magoh	-0.022
mars2	0.146	fam50a	-0.022
si:ch211-282j17.12	0.142	rexo4	-0.022
si:ch211-209a2.2	0.142	rpf1	-0.022
XLOC-007715	0.141	znf593	-0.022
mtx1a	0.139	ssu72	-0.022
LOC108192079	0.138	thoc7	-0.022
XLOC-006152	0.136	eif4g1a	-0.022
tex11	0.134	sf3b5	-0.022
CABZ01033540.1	0.131	pfn2l	-0.022
mst1	0.131	smarca4a	-0.022
fbxo40.1	0.130	ptges3b	-0.021
p2ry11	0.127	zmat2	-0.021
CR391940.1	0.126	polr2gl	-0.021
ptgs2a	0.124	aif1l	-0.021
ttr	0.123	arf2a	-0.021
aqp8b	0.123	csnk2b	-0.021