si:ch211-165i18.2 (axial mesoderm): Daniocell

Daniocell

si:ch211-165i18.2 (axial mesoderm)

si:ch211-165i18.2 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
si:dkey-47k20.4	0.329	si:ch211-222l21.1	-0.070
FP325130.1	0.277	hspb1	-0.068
CR376741.3	0.259	hnrnpaba	-0.067
ltc4s	0.215	hmga1a	-0.065
BX000522.1	0.199	cited4b	-0.065
mst1	0.194	h2afva	-0.064
BX649294.1	0.169	cbx3a	-0.062
xylt2	0.155	nop58	-0.061
si:ch211-226m7.4	0.146	hdac1	-0.061
OSCP1 (1 of many)	0.145	hmgb2b	-0.060
si:ch1073-59l16.1	0.145	syncrip	-0.060
LOC110438498	0.144	rbm8a	-0.060
itih1	0.141	hnrnpl2	-0.060
FO704673.1	0.136	nhp2	-0.058
si:ch211-127b6.2	0.133	hmgb2a	-0.058
AL772314.1	0.132	npm1a	-0.058
BX649355.1	0.123	setb	-0.058
mia	0.123	snrpd2	-0.058
slc10a2	0.123	hmgn6	-0.058
si:ch211-176g13.8	0.122	eny2	-0.057
ptpn23b	0.120	hnrnpub	-0.057
si:ch211-113d11.6	0.115	fthl27	-0.057
cthrc1b	0.111	snu13b	-0.057
slc16a7	0.111	seta	-0.057
vcla	0.109	top1l	-0.056
osgin2	0.108	dkc1	-0.056
BX769173.1	0.108	srsf3b	-0.056
LOC110438040	0.106	sap18	-0.056
lrrc51	0.106	snrpb	-0.056
LOC110438006	0.106	ranbp1	-0.055
srgap1a	0.105	snrpd3l	-0.055
ctgfa	0.105	marcksb	-0.055
wfdc2	0.104	srsf2a	-0.055
chad	0.104	srsf3a	-0.055
CR848784.1	0.103	akap12b	-0.055