| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-003690 | 0.246 | gng3 | -0.211 |
| sox3 | 0.237 | elavl4 | -0.203 |
| her15.1 | 0.227 | stxbp1a | -0.198 |
| XLOC-003689 | 0.227 | sncb | -0.196 |
| cldn5a | 0.225 | stx1b | -0.195 |
| notch3 | 0.223 | snap25a | -0.193 |
| id1 | 0.216 | vamp2 | -0.193 |
| hmgb2a | 0.216 | gpm6ab | -0.186 |
| sox19a | 0.203 | atp6v0cb | -0.185 |
| her4.2 | 0.202 | stmn1b | -0.185 |
| msi1 | 0.200 | rtn1b | -0.184 |
| btg2 | 0.195 | cplx2 | -0.181 |
| si:ch73-21g5.7 | 0.194 | stmn2a | -0.173 |
| sb:cb81 | 0.193 | ywhag2 | -0.173 |
| tspan7 | 0.190 | tmem59l | -0.169 |
| XLOC-003692 | 0.189 | syt2a | -0.168 |
| her4.1 | 0.187 | rbfox1 | -0.168 |
| lfng | 0.184 | nsg2 | -0.166 |
| nrarpb | 0.182 | aplp1 | -0.162 |
| tuba8l | 0.177 | map1aa | -0.162 |
| msna | 0.177 | cplx2l | -0.162 |
| abhd6a | 0.171 | zgc:65894 | -0.161 |
| COX7A2 (1 of many) | 0.170 | ywhah | -0.161 |
| hmgb2b | 0.169 | sncgb | -0.160 |
| mdka | 0.165 | gap43 | -0.160 |
| ranbp1 | 0.165 | calm1a | -0.160 |
| her12 | 0.165 | csdc2a | -0.156 |
| sdc4 | 0.164 | id4 | -0.156 |
| ran | 0.162 | eno2 | -0.155 |
| vamp3 | 0.161 | atp6v1e1b | -0.153 |
| cd82a | 0.160 | atp1a3a | -0.152 |
| si:ch73-281n10.2 | 0.160 | jagn1a | -0.152 |
| notch1b | 0.159 | olfm1b | -0.152 |
| her8a | 0.159 | ndrg4 | -0.152 |
| lrrn1 | 0.158 | rbfox3a | -0.150 |