subcommissural organ spondin
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ctgfa | 0.532 | ptmaa | -0.117 |
| slit1b | 0.522 | tmsb4x | -0.111 |
| col9a3 | 0.502 | ptmab | -0.106 |
| shhb | 0.470 | hmgb3a | -0.098 |
| arxa | 0.463 | hmgb1b | -0.096 |
| clu | 0.448 | hnrnpaba | -0.093 |
| myl9a | 0.443 | ckbb | -0.093 |
| npr3 | 0.435 | fabp3 | -0.093 |
| shha | 0.428 | elavl3 | -0.088 |
| optc | 0.427 | sox3 | -0.083 |
| TC2N | 0.426 | si:ch211-137a8.4 | -0.082 |
| col9a2 | 0.424 | mdkb | -0.081 |
| aplnr2 | 0.420 | rtn1a | -0.080 |
| col8a1a | 0.419 | CU467822.1 | -0.077 |
| cyr61l2 | 0.415 | lfng | -0.074 |
| spon1b | 0.410 | nova2 | -0.074 |
| trabd2b | 0.405 | tmsb | -0.074 |
| r3hdml | 0.394 | prdx2 | -0.073 |
| sulf1 | 0.394 | marcksb | -0.073 |
| vasna | 0.394 | cspg5a | -0.072 |
| b3gnt7l | 0.392 | tmeff1b | -0.071 |
| fxyd1 | 0.372 | mex3b | -0.071 |
| col9a1b | 0.367 | sox11b | -0.071 |
| wnt4b | 0.361 | tubb2b | -0.071 |
| slit2 | 0.358 | zgc:165461 | -0.070 |
| BX908782.3 | 0.354 | si:dkey-56m19.5 | -0.070 |
| scinlb | 0.350 | si:ch211-288g17.3 | -0.070 |
| oc90 | 0.347 | sb:cb81 | -0.070 |
| col2a1b | 0.341 | apex1 | -0.069 |
| lcn15 | 0.336 | setb | -0.067 |
| spon2a | 0.329 | si:dkey-276j7.1 | -0.067 |
| ntn1b | 0.325 | myt1b | -0.067 |
| anxa4 | 0.324 | cadm3 | -0.066 |
| wu:fj39g12 | 0.322 | stmn1b | -0.065 |
| col2a1a | 0.321 | si:ch73-21g5.7 | -0.064 |