| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.265 | eef1a1l1 | -0.273 |
| h1m | 0.261 | hnrnpa0b | -0.217 |
| acp5a | 0.245 | si:ch211-152c2.3 | -0.210 |
| h2af1al | 0.243 | hspb1 | -0.206 |
| spink2.1 | 0.237 | si:ch211-222l21.1 | -0.201 |
| si:dkey-68o6.5 | 0.234 | ybx1 | -0.201 |
| ttf1 | 0.231 | hmgb2a | -0.201 |
| cldnd | 0.229 | rps6 | -0.191 |
| rbm7 | 0.228 | dynll1 | -0.190 |
| dnajc1 | 0.226 | rpl7a | -0.180 |
| mkrn4 | 0.223 | hmga1a | -0.179 |
| gtf2a1 | 0.221 | anp32e | -0.177 |
| ccna1 | 0.220 | rplp0 | -0.177 |
| zgc:173742 | 0.219 | rpsa | -0.176 |
| pho | 0.213 | hmgn6 | -0.171 |
| gpatch4 | 0.210 | aldob | -0.171 |
| zgc:113424 | 0.207 | rps7 | -0.171 |
| npc2 | 0.207 | rplp1 | -0.170 |
| lamp2 | 0.206 | polr3gla | -0.163 |
| blf | 0.202 | hmgn2 | -0.162 |
| nasp | 0.201 | rps2 | -0.161 |
| rcor1 | 0.200 | rpl26 | -0.159 |
| pinx1 | 0.199 | apoeb | -0.159 |
| tent4b | 0.194 | rps19 | -0.158 |
| ska2 | 0.193 | npm1a | -0.157 |
| hdgfl2 | 0.193 | ptmab | -0.156 |
| larp7 | 0.191 | rps5 | -0.156 |
| rtf1 | 0.191 | si:ch73-1a9.3 | -0.153 |
| ctss2.1 | 0.191 | rpl15 | -0.151 |
| mknk2a | 0.190 | rps15a | -0.151 |
| klhl20 | 0.190 | rps20 | -0.148 |
| pfn2 | 0.189 | h2afvb | -0.147 |
| zgc:77118 | 0.189 | rpl7 | -0.146 |
| map7d1a | 0.188 | cirbpb | -0.145 |
| gpkow | 0.187 | rpl32 | -0.145 |