| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.114 | cyt1 | -0.063 |
| h1m | 0.112 | krt4 | -0.063 |
| si:ch211-288g17.3 | 0.111 | anxa1a | -0.062 |
| marcksb | 0.109 | icn | -0.061 |
| ccna1 | 0.108 | s100a10b | -0.060 |
| hdac1 | 0.108 | cyt1l | -0.059 |
| cldnd | 0.107 | krt5 | -0.059 |
| ilf2 | 0.107 | mgst1.2 | -0.057 |
| zgc:173742 | 0.106 | si:ch211-195b11.3 | -0.057 |
| hnrnpub | 0.105 | icn2 | -0.056 |
| ddx39ab | 0.103 | pycard | -0.056 |
| rbm4.3 | 0.102 | wu:fb18f06 | -0.056 |
| hnrnpa0a | 0.101 | zgc:162730 | -0.056 |
| nucks1a | 0.101 | cebpd | -0.055 |
| si:dkey-68o6.5 | 0.101 | krt17 | -0.055 |
| seta | 0.099 | krtt1c19e | -0.055 |
| acp5a | 0.098 | zgc:153284 | -0.055 |
| hnrnpa1a | 0.097 | agr1 | -0.053 |
| smarce1 | 0.097 | anxa1c | -0.053 |
| zgc:100951 | 0.096 | anxa2a | -0.053 |
| ilf3b | 0.095 | tmsb1 | -0.053 |
| atrx | 0.094 | tuba8l2 | -0.053 |
| chd4a | 0.094 | zgc:193505 | -0.053 |
| gnb1b | 0.094 | cst14b.1 | -0.052 |
| nono | 0.094 | si:ch211-105c13.3 | -0.052 |
| setb | 0.094 | ckap4 | -0.051 |
| smarca4a | 0.094 | pnp5a | -0.051 |
| top1l | 0.094 | tspo | -0.051 |
| alyref | 0.093 | aep1 | -0.049 |
| si:ch211-51e12.7 | 0.093 | eef1da | -0.049 |
| zgc:113424 | 0.093 | gsta.1 | -0.049 |
| cth1 | 0.092 | s100v1 | -0.049 |
| ddx5 | 0.092 | s100w | -0.049 |
| hnrnph1l | 0.092 | si:dkey-16p21.8 | -0.049 |
| sf3b5 | 0.090 | si:dkey-222n6.2 | -0.049 |