| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.232 | eef1a1l1 | -0.217 |
| h1m | 0.227 | hnrnpa0b | -0.189 |
| h2af1al | 0.218 | si:ch211-152c2.3 | -0.186 |
| mkrn4 | 0.214 | hspb1 | -0.176 |
| ccna1 | 0.214 | si:ch211-222l21.1 | -0.176 |
| cldnd | 0.212 | hmgb2a | -0.173 |
| acp5a | 0.211 | dynll1 | -0.164 |
| gtf2a1 | 0.209 | hmgn6 | -0.164 |
| zgc:173742 | 0.203 | rpl7a | -0.158 |
| blf | 0.200 | rplp0 | -0.157 |
| ttf1 | 0.199 | ybx1 | -0.157 |
| dnajc1 | 0.199 | rps6 | -0.156 |
| rcor1 | 0.198 | rplp1 | -0.155 |
| spink2.1 | 0.192 | si:ch73-1a9.3 | -0.154 |
| rbm7 | 0.191 | rps4x | -0.150 |
| npc2 | 0.189 | rps7 | -0.147 |
| gpatch4 | 0.186 | ptmab | -0.146 |
| lamp2 | 0.184 | hmga1a | -0.141 |
| zgc:113424 | 0.184 | rpl10a | -0.140 |
| tent4b | 0.183 | rps2 | -0.139 |
| pho | 0.182 | rpl7 | -0.138 |
| zgc:100951 | 0.178 | aldob | -0.137 |
| si:dkey-68o6.5 | 0.178 | hmgn2 | -0.136 |
| si:ch211-132b12.8 | 0.174 | anp32e | -0.135 |
| mknk2a | 0.173 | polr3gla | -0.134 |
| ccnb2 | 0.173 | rpsa | -0.134 |
| gdf3 | 0.173 | apoeb | -0.132 |
| ska2 | 0.172 | rps5 | -0.130 |
| mid1ip1l | 0.171 | rpl26 | -0.129 |
| pfn2 | 0.171 | rps19 | -0.129 |
| hyou1 | 0.170 | rpl11 | -0.127 |
| slc16a3 | 0.170 | rps12 | -0.127 |
| zgc:77118 | 0.168 | rps20 | -0.126 |
| dctpp1 | 0.167 | rpl27 | -0.124 |
| ehmt1b | 0.167 | rpl18a | -0.124 |