| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.142 | NC-002333.4 | -0.126 |
| npc2 | 0.122 | eef1a1l1 | -0.090 |
| cldnd | 0.121 | hmgb2a | -0.080 |
| gtf2a1 | 0.116 | hspb1 | -0.079 |
| spink2.1 | 0.113 | si:ch211-152c2.3 | -0.079 |
| ccna1 | 0.112 | ncl | -0.075 |
| lamp2 | 0.111 | si:ch211-222l21.1 | -0.072 |
| gdf3 | 0.110 | si:ch73-1a9.3 | -0.072 |
| ddx3xb | 0.108 | hmgn6 | -0.070 |
| rbm7 | 0.108 | ybx1 | -0.068 |
| mkrn4 | 0.108 | rplp1 | -0.066 |
| rps6ka3a | 0.107 | dynll1 | -0.063 |
| blf | 0.106 | polr3gla | -0.063 |
| thoc2 | 0.106 | rps19 | -0.063 |
| h2af1al | 0.106 | rps5 | -0.062 |
| cdca7a | 0.106 | rpl7a | -0.062 |
| zfand5b | 0.104 | sox2 | -0.061 |
| pho | 0.102 | hnrnpa0b | -0.059 |
| pfn2 | 0.102 | hmgn2 | -0.058 |
| si:dkey-68o6.5 | 0.102 | rps6 | -0.057 |
| spcs2 | 0.101 | rpsa | -0.055 |
| dnajc1 | 0.100 | crabp2b | -0.055 |
| acp5a | 0.099 | ptmab | -0.052 |
| zgc:173742 | 0.098 | rps7 | -0.051 |
| ttf1 | 0.098 | aldob | -0.051 |
| tent4b | 0.098 | anp32e | -0.051 |
| epcam | 0.097 | rpl18a | -0.051 |
| ccna2 | 0.097 | alcamb | -0.050 |
| rcor1 | 0.096 | pkdccb | -0.050 |
| brd2a | 0.095 | rpl11 | -0.049 |
| rmnd5b | 0.095 | hmga1a | -0.048 |
| zgc:77118 | 0.095 | rpl7 | -0.048 |
| spint2 | 0.094 | pou5f3 | -0.048 |
| avd | 0.094 | rps20 | -0.047 |
| zgc:101744 | 0.094 | her3 | -0.047 |