| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| notch3 | 0.391 | atp6v0cb | -0.192 |
| her12 | 0.358 | snap25b | -0.187 |
| si:ch73-21g5.7 | 0.357 | rnasekb | -0.166 |
| her4.1 | 0.350 | gapdhs | -0.164 |
| XLOC-003690 | 0.344 | syt5b | -0.163 |
| id1 | 0.339 | ckbb | -0.160 |
| notch1b | 0.328 | atp6v1e1b | -0.158 |
| lfng | 0.321 | sypb | -0.157 |
| her4.2 | 0.315 | atpv0e2 | -0.155 |
| her15.1 | 0.311 | atp6v1g1 | -0.149 |
| sox9b | 0.297 | vamp2 | -0.141 |
| XLOC-003689 | 0.292 | crx | -0.138 |
| XLOC-003692 | 0.289 | ndrg4 | -0.136 |
| sox3 | 0.287 | rs1a | -0.135 |
| LOC101886429 | 0.286 | atp1b2a | -0.135 |
| fzd5 | 0.283 | calm1a | -0.133 |
| akap12b | 0.274 | otx5 | -0.131 |
| CR848047.1 | 0.271 | atp1a3a | -0.131 |
| CU467822.1 | 0.270 | sncb | -0.130 |
| gas1b | 0.269 | calb2b | -0.124 |
| abhd6a | 0.257 | gng3 | -0.123 |
| her4.4 | 0.252 | atp6ap2 | -0.121 |
| CU634008.1 | 0.249 | stmn1b | -0.119 |
| LOC798783 | 0.246 | sh3gl2a | -0.118 |
| ncalda | 0.245 | neurod1 | -0.117 |
| her8a | 0.244 | pcbp3 | -0.116 |
| ascl1a | 0.240 | tpi1b | -0.115 |
| nrarpa | 0.239 | gng13b | -0.114 |
| cald1a | 0.239 | ppdpfb | -0.113 |
| mdka | 0.237 | olfm1b | -0.110 |
| ccnd1 | 0.235 | ppp1r14c | -0.110 |
| rrm1 | 0.233 | cnrip1b | -0.110 |
| pcna | 0.232 | hmgn6 | -0.109 |
| msna | 0.228 | cpe | -0.108 |
| dla | 0.228 | epb41a | -0.108 |