| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| atoh1a | 0.309 | gng3 | -0.080 |
| atoh8 | 0.215 | rtn1a | -0.079 |
| olig3 | 0.185 | stmn1b | -0.079 |
| atoh1b | 0.171 | gpm6ab | -0.079 |
| cldn5a | 0.166 | sncb | -0.076 |
| msx1b | 0.161 | rtn1b | -0.075 |
| her12 | 0.159 | zc4h2 | -0.075 |
| her2 | 0.155 | elavl4 | -0.072 |
| XLOC-003690 | 0.152 | ywhah | -0.071 |
| notch3 | 0.149 | atp6v0cb | -0.070 |
| id3 | 0.146 | vamp2 | -0.067 |
| wnt10b | 0.144 | gpm6aa | -0.067 |
| id1 | 0.143 | si:dkey-276j7.1 | -0.063 |
| cdh6 | 0.139 | mllt11 | -0.063 |
| XLOC-003689 | 0.136 | ywhag2 | -0.062 |
| her15.1 | 0.130 | stx1b | -0.062 |
| msx3 | 0.127 | si:dkeyp-75h12.5 | -0.062 |
| fzd5 | 0.125 | stxbp1a | -0.062 |
| her4.1 | 0.124 | rnasekb | -0.062 |
| lfng | 0.123 | nsg2 | -0.061 |
| sox3 | 0.119 | gap43 | -0.061 |
| cd82a | 0.119 | dpysl3 | -0.061 |
| fibinb | 0.118 | atp6v1e1b | -0.061 |
| mdka | 0.115 | stmn2a | -0.061 |
| btg2 | 0.115 | csdc2a | -0.060 |
| angptl4 | 0.115 | fez1 | -0.060 |
| vax2 | 0.113 | h2afx1 | -0.060 |
| XLOC-003692 | 0.112 | ckbb | -0.060 |
| epha2a | 0.111 | gng2 | -0.059 |
| eno4 | 0.108 | tmem59l | -0.058 |
| hmga2 | 0.107 | gapdhs | -0.058 |
| si:ch73-21g5.7 | 0.107 | cd99l2 | -0.057 |
| abhd6a | 0.106 | mab21l2 | -0.057 |
| lbr | 0.105 | id4 | -0.057 |
| sdc4 | 0.105 | zgc:65894 | -0.057 |