| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| scrt1a | 0.243 | id1 | -0.175 |
| scrt2 | 0.223 | XLOC-003690 | -0.161 |
| jagn1a | 0.219 | cldn5a | -0.154 |
| stap2a | 0.218 | hmgb2a | -0.143 |
| myt1b | 0.214 | sox3 | -0.134 |
| nsg2 | 0.207 | si:ch73-281n10.2 | -0.133 |
| elavl3 | 0.201 | mdka | -0.130 |
| robo3 | 0.191 | msna | -0.129 |
| nhlh2 | 0.188 | her15.1 | -0.127 |
| stxbp1a | 0.188 | sdc4 | -0.124 |
| uncx | 0.187 | notch3 | -0.122 |
| dclk2a | 0.186 | vamp3 | -0.119 |
| lhx1a | 0.186 | COX7A2 (1 of many) | -0.119 |
| si:dkey-280e21.3 | 0.184 | XLOC-003689 | -0.118 |
| atcaya | 0.180 | sox19a | -0.118 |
| gdf11 | 0.178 | her12 | -0.116 |
| pax2a | 0.177 | msi1 | -0.115 |
| epb41a | 0.177 | stmn1a | -0.114 |
| adam22 | 0.176 | dut | -0.114 |
| rtn1a | 0.176 | selenoh | -0.113 |
| thsd7aa | 0.174 | pcna | -0.112 |
| lhx5 | 0.173 | zgc:56493 | -0.109 |
| ube2ql1 | 0.173 | cd82a | -0.109 |
| vamp2 | 0.172 | tuba8l | -0.107 |
| pax2b | 0.171 | tuba8l4 | -0.107 |
| stx1b | 0.171 | ranbp1 | -0.106 |
| tmeff1b | 0.171 | fosab | -0.106 |
| golga7ba | 0.169 | sox2 | -0.104 |
| stmn1b | 0.169 | her2 | -0.104 |
| myt1a | 0.168 | ccnd1 | -0.103 |
| gng2 | 0.167 | si:ch73-265d7.2 | -0.103 |
| ebf3a | 0.166 | rpa3 | -0.102 |
| ywhah | 0.165 | psat1 | -0.101 |
| syt2a | 0.165 | anp32b | -0.101 |
| cbfa2t3 | 0.163 | nop58 | -0.099 |