Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| laptm5 | 0.292 | fabp3 | -0.031 |
| fcer1gl | 0.287 | mdka | -0.029 |
| spi1b | 0.284 | hmgb1b | -0.028 |
| cxcr3.2 | 0.278 | jpt1b | -0.027 |
| coro1a | 0.274 | hmgb3a | -0.026 |
| myo1f | 0.270 | nova2 | -0.025 |
| FERMT3 (1 of many) | 0.268 | pfn2l | -0.025 |
| LOC108180725 | 0.265 | tuba1c | -0.025 |
| zgc:64051 | 0.263 | sparc | -0.024 |
| itgb2 | 0.261 | tmeff1b | -0.022 |
| itgae.2 | 0.260 | her15.1 | -0.022 |
| spi1a | 0.260 | foxp4 | -0.021 |
| ptprc | 0.257 | gpm6aa | -0.021 |
| il1b | 0.256 | rtn1a | -0.021 |
| si:ch211-102c2.4 | 0.256 | si:ch73-46j18.5 | -0.021 |
| LOC100536213 | 0.255 | tuba1a | -0.021 |
| plek | 0.255 | fam168a | -0.020 |
| cmklr1 | 0.254 | h1f0 | -0.020 |
| wasb | 0.254 | mdkb | -0.020 |
| si:ch211-243a20.4 | 0.254 | tspan7 | -0.020 |
| nrros | 0.252 | vdac1 | -0.020 |
| glipr1a | 0.251 | elavl3 | -0.019 |
| adgrg3 | 0.248 | meis1b | -0.019 |
| si:dkey-102g19.3 | 0.248 | rnasekb | -0.019 |
| grap2b | 0.247 | si:dkey-28b4.7 | -0.019 |
| si:zfos-741a10.3 | 0.247 | hnrnpa0a | -0.018 |
| gpr183a | 0.245 | id1 | -0.018 |
| CU499330.1 | 0.244 | marcksb | -0.018 |
| sc:d156 | 0.244 | pbx4 | -0.018 |
| mpeg1.1 | 0.241 | pmp22a | -0.018 |
| ccr9a | 0.240 | tubb5 | -0.018 |
| cx32.2 | 0.239 | XLOC-003690 | -0.018 |
| CABZ01073834.1 | 0.238 | mfap2 | -0.018 |
| CT027744.2 | 0.238 | agrn | -0.017 |
| lcp1 | 0.238 | cdh2 | -0.017 |