| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.493 | eef1a1l1 | -0.495 |
| h1m | 0.485 | si:ch211-222l21.1 | -0.436 |
| acp5a | 0.470 | hnrnpa0b | -0.420 |
| ccna1 | 0.467 | dynll1 | -0.409 |
| cldnd | 0.462 | si:ch211-152c2.3 | -0.404 |
| spink2.1 | 0.460 | hspb1 | -0.402 |
| h2af1al | 0.459 | si:ch73-1a9.3 | -0.394 |
| zgc:173742 | 0.429 | ybx1 | -0.389 |
| blf | 0.428 | rplp1 | -0.384 |
| gtf2a1 | 0.423 | hmga1a | -0.383 |
| npc2 | 0.411 | hmgb2a | -0.363 |
| dnajc1 | 0.408 | rps6 | -0.359 |
| rcor1 | 0.399 | ptmab | -0.357 |
| zgc:113424 | 0.397 | rpl7a | -0.354 |
| rbm7 | 0.395 | anp32e | -0.351 |
| mid1ip1l | 0.393 | hmgn6 | -0.349 |
| zgc:100951 | 0.392 | rplp0 | -0.345 |
| slc16a3 | 0.380 | rps7 | -0.344 |
| cldng | 0.375 | rps4x | -0.343 |
| mknk2a | 0.372 | rpl26 | -0.338 |
| zgc:77118 | 0.369 | rps19 | -0.335 |
| lamp2 | 0.366 | rps12 | -0.335 |
| pfn2 | 0.364 | rps15a | -0.332 |
| gdf3 | 0.362 | aldob | -0.330 |
| dctpp1 | 0.360 | rps2 | -0.330 |
| si:ch211-132b12.8 | 0.360 | si:dkey-151g10.6 | -0.326 |
| ska2 | 0.359 | rps5 | -0.326 |
| tent5c | 0.359 | npm1a | -0.325 |
| pabpn1l | 0.358 | rpsa | -0.320 |
| rbpms2b | 0.354 | hmgn2 | -0.320 |
| tent4b | 0.353 | polr3gla | -0.316 |
| si:dkey-68o6.5 | 0.352 | rpl27 | -0.312 |
| gpatch4 | 0.348 | marcksl1b | -0.312 |
| ttf1 | 0.346 | apoeb | -0.311 |
| si:ch73-299h12.2 | 0.345 | rpl7 | -0.309 |