| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lhx5 | 0.178 | tbx16 | -0.167 |
| her3 | 0.178 | zgc:56676 | -0.138 |
| pkdccb | 0.161 | tbxta | -0.129 |
| alcamb | 0.144 | ved | -0.127 |
| sfrp1a | 0.138 | eve1 | -0.114 |
| sox2 | 0.135 | glulb | -0.109 |
| otx2a | 0.115 | ddit4 | -0.103 |
| prdm14 | 0.114 | bambia | -0.102 |
| pfkfb4b | 0.109 | hes6 | -0.099 |
| si:ch73-141c7.1 | 0.108 | bzw1b | -0.099 |
| lfng | 0.105 | si:ch73-160h15.3 | -0.095 |
| irx7 | 0.100 | wnt11f2 | -0.092 |
| tfap2a | 0.094 | ccna2 | -0.091 |
| mdkb | 0.091 | fopnl | -0.091 |
| hesx1 | 0.088 | ctsba | -0.090 |
| hirip3 | 0.088 | snai1a | -0.087 |
| crabp2b | 0.088 | fscn1a | -0.087 |
| acin1a | 0.087 | si:ch211-15b10.6 | -0.086 |
| galnt7 | 0.086 | blf | -0.085 |
| si:ch211-137a8.4 | 0.085 | vent | -0.084 |
| sult6b1 | 0.084 | vox | -0.082 |
| calm2b | 0.083 | zgc:56699 | -0.082 |
| tcf7l1a | 0.081 | cdx4 | -0.081 |
| irx1b | 0.081 | vgll4l | -0.080 |
| pim2 | 0.080 | gtf2a1 | -0.080 |
| nova1 | 0.078 | sebox | -0.079 |
| her6 | 0.078 | h1m | -0.078 |
| rsf1b.1 | 0.078 | lmnb1 | -0.078 |
| zic3 | 0.078 | BX927327.1 | -0.078 |
| admp | 0.078 | ddx5 | -0.078 |
| slkb | 0.078 | zgc:173742 | -0.077 |
| nipblb | 0.078 | osr1 | -0.075 |
| hspe1 | 0.078 | psme3 | -0.075 |
| top2a | 0.078 | fdx1 | -0.075 |
| si:ch73-335l21.4 | 0.078 | notum1a | -0.075 |