| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| notch3 | 0.263 | elavl3 | -0.242 |
| id1 | 0.256 | myt1b | -0.216 |
| tuba8l | 0.223 | stmn1b | -0.209 |
| cldn5a | 0.223 | gng3 | -0.194 |
| XLOC-003690 | 0.208 | stxbp1a | -0.192 |
| cd82a | 0.203 | elavl4 | -0.191 |
| msi1 | 0.202 | sncb | -0.188 |
| fgfr2 | 0.198 | vamp2 | -0.187 |
| her15.1 | 0.197 | rtn1a | -0.182 |
| sox3 | 0.196 | gpm6ab | -0.181 |
| zgc:165461 | 0.195 | stx1b | -0.181 |
| sox19a | 0.195 | snap25a | -0.177 |
| msna | 0.194 | atp6v0cb | -0.171 |
| akap12b | 0.193 | zc4h2 | -0.168 |
| sox2 | 0.191 | calm1a | -0.168 |
| lbr | 0.186 | rtn1b | -0.166 |
| her2 | 0.183 | tmem59l | -0.165 |
| sdc4 | 0.181 | nsg2 | -0.164 |
| metrnla | 0.180 | syt2a | -0.164 |
| mdka | 0.179 | jagn1a | -0.163 |
| ntn1a | 0.178 | cplx2 | -0.163 |
| chaf1a | 0.177 | gng2 | -0.163 |
| si:ch211-212k18.5 | 0.177 | stmn2a | -0.160 |
| fzd7a | 0.175 | onecut1 | -0.160 |
| nrarpa | 0.175 | ywhag2 | -0.160 |
| mki67 | 0.174 | scrt2 | -0.159 |
| fbxo5 | 0.173 | myt1a | -0.159 |
| hmga2 | 0.173 | LOC100537384 | -0.158 |
| tuba8l4 | 0.172 | gap43 | -0.156 |
| her8a | 0.172 | ywhah | -0.155 |
| ptch2 | 0.172 | csdc2a | -0.154 |
| hmgb2a | 0.171 | pik3r3b | -0.154 |
| mibp | 0.171 | onecut2 | -0.153 |
| fabp7a | 0.170 | aplp1 | -0.152 |
| gpm6bb | 0.168 | rbfox1 | -0.152 |