| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.250 | eef1a1l1 | -0.233 |
| cldnd | 0.238 | hmgb2a | -0.209 |
| acp5a | 0.237 | si:ch73-1a9.3 | -0.201 |
| h2af1al | 0.235 | hnrnpa0b | -0.200 |
| ccna1 | 0.223 | hmga1a | -0.198 |
| spink2.1 | 0.223 | si:ch211-222l21.1 | -0.196 |
| zgc:173742 | 0.221 | dynll1 | -0.194 |
| h1m | 0.219 | hspb1 | -0.191 |
| mkrn4 | 0.217 | si:ch211-152c2.3 | -0.185 |
| zgc:113424 | 0.214 | si:dkey-151g10.6 | -0.180 |
| gtf2a1 | 0.208 | hmgn6 | -0.175 |
| ska2 | 0.206 | rplp1 | -0.174 |
| npc2 | 0.205 | rpl26 | -0.171 |
| lamp2 | 0.205 | rps15a | -0.168 |
| tent5c | 0.204 | ptmab | -0.168 |
| mid1ip1l | 0.204 | npm1a | -0.166 |
| rcor1 | 0.198 | rplp0 | -0.166 |
| tent4b | 0.198 | anp32e | -0.165 |
| rbm7 | 0.197 | rpl7a | -0.165 |
| dnajc1 | 0.196 | rps19 | -0.165 |
| ttf1 | 0.196 | ybx1 | -0.164 |
| rbpms2b | 0.196 | stm | -0.163 |
| cldng | 0.195 | polr3gla | -0.159 |
| dctpp1 | 0.194 | rps6 | -0.159 |
| wee2 | 0.194 | rpl11 | -0.159 |
| slc16a3 | 0.193 | aldob | -0.156 |
| blf | 0.191 | rps7 | -0.155 |
| si:ch73-299h12.2 | 0.188 | apoeb | -0.153 |
| maco1a | 0.186 | rpl27 | -0.152 |
| ctss2.1 | 0.186 | marcksl1b | -0.151 |
| si:ch211-132b12.8 | 0.185 | rps12 | -0.150 |
| slc25a25a | 0.185 | rpl32 | -0.145 |
| gdf3 | 0.184 | rps5 | -0.144 |
| arfip1 | 0.184 | rps15 | -0.143 |
| pfn2 | 0.183 | nop2 | -0.140 |