| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.143 | NC-002333.4 | -0.154 |
| gtf2a1 | 0.131 | hmgb2a | -0.079 |
| lamp2 | 0.127 | sox2 | -0.074 |
| ccna2 | 0.121 | zgc:110425 | -0.070 |
| ccna1 | 0.120 | mt-co1 | -0.068 |
| rbm7 | 0.118 | eef1a1l1 | -0.068 |
| zgc:56676 | 0.117 | si:ch211-222l21.1 | -0.066 |
| spink2.1 | 0.116 | si:dkey-108k21.10 | -0.065 |
| stk35l | 0.115 | ncl | -0.065 |
| blf | 0.114 | si:ch211-113a14.18 | -0.063 |
| cldnd | 0.111 | si:ch73-1a9.3 | -0.062 |
| acp5a | 0.111 | rplp1 | -0.061 |
| pttg1 | 0.111 | hmgn2 | -0.061 |
| glulb | 0.111 | rpl11 | -0.061 |
| csnk1g2a | 0.109 | akap12b | -0.059 |
| cdc6 | 0.108 | ptmab | -0.058 |
| mkrn4 | 0.108 | si:ch211-113a14.24 | -0.056 |
| patl1 | 0.107 | crabp2b | -0.052 |
| zgc:173742 | 0.106 | npm1a | -0.052 |
| ddx3xb | 0.106 | si:ch211-137a8.4 | -0.049 |
| rab32a | 0.106 | rpl7a | -0.048 |
| h1m | 0.106 | zgc:153405 | -0.047 |
| npc2 | 0.105 | apoc1 | -0.047 |
| zgc:113424 | 0.103 | rps6 | -0.047 |
| hm13 | 0.103 | serpinh1b | -0.046 |
| dnajc1 | 0.103 | alcamb | -0.046 |
| ctsla | 0.103 | ybx1 | -0.044 |
| cdca7a | 0.103 | mt-co2 | -0.044 |
| gdf3 | 0.103 | polr3gla | -0.044 |
| tmed2 | 0.101 | rps19 | -0.043 |
| si:dkey-68o6.5 | 0.101 | rpsa | -0.043 |
| avd | 0.101 | cdx4 | -0.043 |
| larp7 | 0.099 | dynll1 | -0.043 |
| cldn7b | 0.098 | slc16a9b | -0.042 |
| ctsba | 0.098 | si:ch211-262h13.3 | -0.042 |