lrata (mesenchyme): Daniocell

Daniocell

lrata (mesenchyme)

lecithin retinol acyltransferase a ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
LOC100535869	0.134	foxc1b	-0.024
BX511024.1	0.101	cnmd	-0.022
oscp1b	0.085	col2a1a	-0.022
v2ra18	0.082	col9a1a	-0.021
zgc:158222	0.075	col9a2	-0.021
bsnd	0.072	fgfbp2b	-0.021
LOC100534829	0.070	col9a3	-0.020
zgc:174259	0.067	matn4	-0.020
lhb	0.067	rplp1	-0.019
en1a	0.067	rpl29	-0.018
si:ch211-272h9.3	0.065	mab21l2	-0.018
CU694264.1	0.064	dlx5a	-0.018
hoxc3a	0.061	si:ch211-156j16.1	-0.017
mrvi1	0.056	rplp2l	-0.017
LOC100330348	0.055	col12a1a	-0.017
pjvk	0.054	si:ch211-39i22.1	-0.017
LOC103911208	0.054	col11a2	-0.017
BX936342.2	0.053	dlx4a	-0.016
zgc:195173	0.053	cdh11	-0.016
v2ra16	0.052	sox6	-0.015
LOC101884915	0.052	CYTL1	-0.015
XLOC-010379	0.051	col2a1b	-0.015
si:dkey-11o1.3	0.051	itga10	-0.015
efna2a	0.050	eya1	-0.015
LOC110439637	0.050	col8a2	-0.015
meis2b	0.050	sox5	-0.015
BX119926.1	0.049	six4a	-0.015
si:ch211-122l14.7	0.049	col11a1b	-0.015
itga2.1	0.049	rpl3	-0.015
LOC108191695	0.048	wfdc2	-0.015
ptger4c	0.047	phlda3	-0.014
BX324233.1	0.047	dlx3b	-0.014
si:ch211-106h4.12	0.046	foxp4	-0.014
cnga2a	0.045	dlx1a	-0.014
klhl5	0.044	col11a1a	-0.014