| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.222 | asb11 | -0.109 |
| tbxta | 0.186 | cited4b | -0.109 |
| wnt11f2 | 0.156 | sox3 | -0.105 |
| BX927327.1 | 0.153 | si:ch211-173m16.2 | -0.104 |
| eve1 | 0.151 | inka1a | -0.095 |
| im:7138239 | 0.148 | nanog | -0.086 |
| wnt5b | 0.143 | si:ch1073-80i24.3 | -0.085 |
| rasgef1ba | 0.143 | shisa2a | -0.085 |
| tpbga | 0.140 | blf | -0.083 |
| p4ha2 | 0.126 | glulb | -0.083 |
| hes6 | 0.125 | si:dkey-68o6.5 | -0.080 |
| wu:fb97g03 | 0.123 | zgc:173742 | -0.074 |
| gbx1 | 0.119 | thoc7 | -0.074 |
| cdx1a | 0.119 | zgc:56676 | -0.073 |
| BX927258.1 | 0.109 | dnajb1b | -0.073 |
| lef1 | 0.108 | id1 | -0.073 |
| znf703 | 0.106 | zic2b | -0.073 |
| tuft1a | 0.102 | h1m | -0.071 |
| ybx1 | 0.099 | mkrn4 | -0.071 |
| sp5l | 0.091 | npc2 | -0.071 |
| cnksr3 | 0.089 | epcam | -0.070 |
| msx1b | 0.089 | dnajc1 | -0.070 |
| aldh1a2 | 0.088 | cxcr4b | -0.069 |
| nradd | 0.088 | rbm7 | -0.068 |
| FP236157.3 | 0.087 | nnr | -0.066 |
| sp5a | 0.087 | stk35l | -0.063 |
| znf503 | 0.086 | pho | -0.062 |
| fhl5 | 0.086 | ccna1 | -0.060 |
| LOC110437802 | 0.084 | ccna2 | -0.060 |
| si:dkey-221j11.3 | 0.084 | vgll4l | -0.060 |
| arg2 | 0.083 | si:ch73-299h12.3 | -0.059 |
| LOC103909796 | 0.082 | gadd45ga | -0.059 |
| LOC110439565 | 0.081 | oclna | -0.058 |
| LOC101884747 | 0.081 | rpa3 | -0.058 |
| scn4aa | 0.081 | rps27l | -0.058 |