| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lhx6 | 0.349 | hmgb2a | -0.058 |
| lhx8b | 0.295 | hmga1a | -0.050 |
| nkx2.1 | 0.236 | hmgb2b | -0.047 |
| dlx5a | 0.186 | stmn1a | -0.044 |
| arxa | 0.178 | id1 | -0.042 |
| six6a | 0.143 | pcna | -0.041 |
| arxb | 0.141 | XLOC-003690 | -0.041 |
| dlx6a | 0.135 | her15.1 | -0.040 |
| erich3 | 0.131 | anp32b | -0.040 |
| vax1 | 0.129 | mdka | -0.040 |
| foxg1a | 0.120 | si:dkey-151g10.6 | -0.039 |
| slc6a1b | 0.119 | npm1a | -0.039 |
| dlx1a | 0.110 | ranbp1 | -0.038 |
| dlx2a | 0.102 | XLOC-003689 | -0.038 |
| six6b | 0.099 | selenoh | -0.038 |
| zic1 | 0.098 | rps12 | -0.037 |
| CU929240.1 | 0.097 | nop58 | -0.037 |
| six3b | 0.095 | rpl5b | -0.037 |
| rrad | 0.095 | chaf1a | -0.037 |
| kctd4 | 0.093 | msna | -0.037 |
| gad2 | 0.089 | sox19a | -0.037 |
| adarb2 | 0.088 | snu13b | -0.036 |
| slc32a1 | 0.087 | rplp1 | -0.036 |
| celf4 | 0.083 | mcm7 | -0.036 |
| gbx1 | 0.083 | eef1a1l1 | -0.036 |
| spock3 | 0.079 | zgc:56493 | -0.036 |
| BX469930.2 | 0.078 | rplp2l | -0.036 |
| cygb2 | 0.077 | ccnd1 | -0.036 |
| slc6a1a | 0.076 | XLOC-003692 | -0.035 |
| slc44a5a | 0.076 | mki67 | -0.035 |
| cacna2d2a | 0.074 | rpl11 | -0.035 |
| fabp1b.2 | 0.072 | rrm1 | -0.034 |
| cxxc4 | 0.071 | lig1 | -0.034 |
| sprn2 | 0.070 | banf1 | -0.034 |
| snap25b | 0.069 | lbr | -0.034 |