Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slit1b | 0.201 | ptmab | -0.091 |
| clu | 0.196 | hnrnpaba | -0.063 |
| zgc:112437 | 0.195 | tubb2b | -0.063 |
| wnt4b | 0.193 | hnrnpa0l | -0.063 |
| npr3 | 0.186 | hsp90ab1 | -0.061 |
| ctgfa | 0.185 | khdrbs1a | -0.058 |
| BX908782.3 | 0.180 | h3f3d | -0.057 |
| sparcl1 | 0.168 | hnrnpa0b | -0.057 |
| gpc5b | 0.168 | cirbpa | -0.056 |
| scinlb | 0.166 | cirbpb | -0.055 |
| spon1b | 0.165 | marcksb | -0.054 |
| CR391910.1 | 0.163 | fabp3 | -0.054 |
| wnt4a | 0.161 | hmgb1b | -0.053 |
| trabd2b | 0.161 | h2afvb | -0.053 |
| igfbp2a | 0.159 | si:ch211-288g17.3 | -0.052 |
| r3hdml | 0.158 | hmgn2 | -0.051 |
| bgnb | 0.154 | ddx39ab | -0.050 |
| myl9a | 0.152 | tmsb4x | -0.049 |
| fxyd1 | 0.152 | ptmaa | -0.048 |
| slit2 | 0.151 | snrpf | -0.048 |
| prf1.5 | 0.151 | h3f3a | -0.048 |
| hpgd | 0.150 | hmga1a | -0.048 |
| cyr61l2 | 0.150 | syncrip | -0.047 |
| wu:fj39g12 | 0.150 | ran | -0.046 |
| LOC110439803 | 0.144 | ilf2 | -0.046 |
| ntn1b | 0.144 | hmgn6 | -0.045 |
| shha | 0.144 | snrpg | -0.044 |
| si:ch211-153f2.7 | 0.144 | apex1 | -0.044 |
| vasna | 0.144 | snrpd1 | -0.043 |
| arxa | 0.143 | cct2 | -0.043 |
| FP102018.1 | 0.142 | hmgb2b | -0.043 |
| shhb | 0.142 | si:ch73-1a9.3 | -0.042 |
| urp2 | 0.139 | hnrnpabb | -0.042 |
| gbgt1l2 | 0.138 | si:ch1073-429i10.3.1 | -0.042 |
| rgs3b | 0.137 | smarce1 | -0.041 |