Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ssuh2.3 | 0.352 | hnrnpaba | -0.021 |
| XLOC-020301 | 0.232 | sumo3a | -0.018 |
| XLOC-018363 | 0.225 | h2afva | -0.016 |
| BX571772.1 | 0.195 | ptmab | -0.015 |
| XLOC-023492 | 0.183 | hmgb1b | -0.015 |
| XLOC-028370 | 0.179 | si:ch211-288g17.3 | -0.015 |
| LOC103910040 | 0.159 | seta | -0.015 |
| kdf1b | 0.143 | hmga1a | -0.015 |
| si:ch211-106j24.1 | 0.132 | tubb2b | -0.015 |
| flt4 | 0.127 | cirbpb | -0.015 |
| gpr35.2 | 0.124 | rorb | -0.015 |
| mir733 | 0.123 | h3f3a | -0.015 |
| BX908750.1 | 0.121 | marcksb | -0.014 |
| znf1128 | 0.116 | hmgn2 | -0.014 |
| FO834800.1 | 0.115 | hmgb1a | -0.014 |
| cyp3c4 | 0.114 | srsf4 | -0.014 |
| mir214a | 0.108 | marcksl1b | -0.013 |
| cyp1c2 | 0.103 | hmgn6 | -0.013 |
| col1a2 | 0.100 | hnrnpabb | -0.013 |
| ctsk | 0.098 | psmb1 | -0.013 |
| mrc2 | 0.096 | ilf3b | -0.013 |
| mmp2 | 0.094 | cirbpa | -0.013 |
| col5a2a | 0.093 | snrpf | -0.013 |
| alx4a | 0.090 | snrpe | -0.013 |
| olfml3b | 0.090 | hnrnpub | -0.013 |
| igsf10 | 0.089 | si:ch211-137a8.4 | -0.013 |
| XLOC-041870 | 0.089 | hmgb2a | -0.013 |
| agtr2 | 0.088 | arl6ip1 | -0.013 |
| pmp22a | 0.087 | snrpd2 | -0.012 |
| col6a1 | 0.087 | sae1 | -0.012 |
| BX248082.1 | 0.086 | smarcd1 | -0.012 |
| col5a1 | 0.086 | setb | -0.012 |
| si:ch211-106k21.5 | 0.084 | snrpd1 | -0.012 |
| socs3a | 0.084 | ilf2 | -0.012 |
| plod2 | 0.083 | gpm6aa | -0.012 |