Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| prok1 | 0.176 | hmgb2a | -0.034 |
| si:dkey-112a7.5 | 0.150 | si:dkey-151g10.6 | -0.032 |
| chrna4b | 0.134 | hmga1a | -0.030 |
| zmat4b | 0.130 | stmn1a | -0.026 |
| LO018196.1 | 0.116 | rpsa | -0.026 |
| BX649529.1 | 0.094 | apex1 | -0.026 |
| shisal1a | 0.092 | tuba8l4 | -0.026 |
| tgfa | 0.084 | hmgb2b | -0.025 |
| otx1 | 0.082 | pcna | -0.025 |
| nkx1.2lb | 0.080 | eef1a1l1 | -0.025 |
| tal1 | 0.077 | rplp2l | -0.025 |
| sox2 | 0.076 | msna | -0.025 |
| BX004774.2 | 0.074 | eif5a2 | -0.025 |
| dcn | 0.073 | tspan7 | -0.024 |
| BX005003.1 | 0.069 | ranbp1 | -0.024 |
| HTR7 | 0.069 | snrpb | -0.024 |
| lmod2b | 0.068 | rps28 | -0.024 |
| slc6a1b | 0.067 | rpl12 | -0.024 |
| matk | 0.058 | anp32b | -0.024 |
| sall3a | 0.058 | rplp1 | -0.024 |
| nrxn3a | 0.056 | rpl23a | -0.024 |
| akr1b1 | 0.054 | rps9 | -0.023 |
| msi2a | 0.053 | rpl29 | -0.023 |
| chrna6 | 0.053 | XLOC-003690 | -0.023 |
| gata3 | 0.053 | sox3 | -0.023 |
| pbx1a | 0.053 | nop56 | -0.023 |
| tal2 | 0.052 | rps19 | -0.023 |
| camk1db | 0.052 | mdka | -0.023 |
| ptprda | 0.050 | rpl38 | -0.023 |
| sphkap | 0.050 | npm1a | -0.023 |
| CR318658.1 | 0.050 | rps27a | -0.023 |
| si:ch73-380n15.2 | 0.049 | selenoh | -0.023 |
| slc32a1 | 0.047 | rtca | -0.023 |
| prox1b | 0.047 | rps12 | -0.023 |
| gad2 | 0.047 | rpl23 | -0.023 |