Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-134a4.6 | 0.741 | rpl18 | -0.056 |
| msx3 | 0.320 | rpl4 | -0.047 |
| sytl2a | 0.308 | rps17 | -0.042 |
| msantd1 | 0.282 | ubc | -0.040 |
| sp8b | 0.263 | cldnh | -0.038 |
| si:ch211-218g4.2 | 0.244 | eif4a1b | -0.038 |
| mapkapk3 | 0.226 | mt-co1 | -0.036 |
| rab23 | 0.196 | eif3m | -0.035 |
| si:dkeyp-14d3.1 | 0.194 | h2afx1 | -0.035 |
| LOC100536609 | 0.192 | rpl22l1 | -0.034 |
| si:ch211-63i20.3 | 0.192 | prr13 | -0.034 |
| XLOC-011830 | 0.192 | slc25a3b | -0.034 |
| aamdc | 0.181 | csnk1a1 | -0.033 |
| SFMBT1 | 0.180 | rpl5b | -0.033 |
| zgc:110353 | 0.179 | atp5mc3b | -0.033 |
| gtf3c5 | 0.173 | s100v2 | -0.032 |
| tspan9b | 0.169 | pim1 | -0.032 |
| si:dkey-156n14.3 | 0.165 | cox6b2 | -0.032 |
| cbln12 | 0.163 | ddx5 | -0.031 |
| car15 | 0.162 | mt-atp6 | -0.031 |
| LOC110439513 | 0.162 | eif2s3 | -0.031 |
| eloal | 0.160 | ier5 | -0.031 |
| XLOC-033512 | 0.157 | atp5pf | -0.030 |
| gpt2 | 0.157 | ccni | -0.030 |
| prickle1b | 0.155 | sumo2b | -0.029 |
| LOC110438259 | 0.149 | cyt1 | -0.029 |
| si:ch73-335l21.1 | 0.143 | chac1 | -0.029 |
| ctrl | 0.139 | mt-nd1 | -0.027 |
| CU915770.2 | 0.138 | atp5f1b | -0.027 |
| snx33 | 0.136 | si:ch73-1a9.3 | -0.027 |
| larp6b | 0.134 | si:ch1073-429i10.3.1 | -0.027 |
| LOC110439924 | 0.134 | syf2 | -0.027 |
| cabp4 | 0.134 | bsg | -0.027 |
| kmt5c | 0.133 | dap1b | -0.027 |
| wdr45b | 0.133 | h3f3c | -0.027 |