Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| snap25a | 0.134 | XLOC-003690 | -0.090 |
| sncb | 0.131 | her15.1 | -0.087 |
| elavl4 | 0.130 | id1 | -0.086 |
| cplx2l | 0.130 | mdka | -0.084 |
| gng3 | 0.128 | hmgb2a | -0.076 |
| rbfox1 | 0.126 | sox3 | -0.075 |
| stx1b | 0.125 | XLOC-003689 | -0.075 |
| stxbp1a | 0.123 | msna | -0.072 |
| tmem59l | 0.120 | cldn5a | -0.071 |
| syt2a | 0.120 | notch3 | -0.071 |
| sncgb | 0.119 | btg2 | -0.068 |
| rtn1b | 0.119 | sparc | -0.068 |
| stmn2a | 0.119 | XLOC-003692 | -0.067 |
| ywhag2 | 0.117 | sdc4 | -0.066 |
| atp6v0cb | 0.115 | vamp3 | -0.066 |
| gabrb4 | 0.114 | her4.2 | -0.065 |
| vamp2 | 0.111 | rpl12 | -0.065 |
| olfm1b | 0.110 | msi1 | -0.065 |
| eno2 | 0.109 | tspan7 | -0.063 |
| cplx2 | 0.109 | COX7A2 (1 of many) | -0.063 |
| nsg2 | 0.108 | rplp1 | -0.063 |
| kcnc3a | 0.106 | rps2 | -0.062 |
| tmsb2 | 0.106 | her4.1 | -0.062 |
| csdc2a | 0.105 | zgc:56493 | -0.060 |
| atp1a3a | 0.104 | sb:cb81 | -0.060 |
| ywhah | 0.104 | cd82a | -0.060 |
| zgc:65894 | 0.103 | rpl29 | -0.059 |
| rbfox3a | 0.103 | her12 | -0.059 |
| sypb | 0.103 | si:dkey-151g10.6 | -0.059 |
| map1aa | 0.102 | sox19a | -0.058 |
| nptna | 0.101 | rplp2l | -0.058 |
| atp2b3a | 0.101 | actb2 | -0.057 |
| calm1a | 0.100 | gfap | -0.057 |
| stmn4l | 0.099 | si:ch211-286b5.5 | -0.057 |
| ndufa4 | 0.099 | eef1a1l1 | -0.057 |