Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-121j17.5 | 0.416 | cirbpa | -0.048 |
| LRRTM4 | 0.384 | COX5B | -0.048 |
| cpa1 | 0.352 | atp5f1b | -0.042 |
| fndc5b | 0.349 | rps11 | -0.041 |
| hcrt | 0.344 | zgc:193541 | -0.040 |
| cnbd1 | 0.313 | rpl37 | -0.039 |
| si:ch211-198m17.1 | 0.308 | si:ch211-222l21.1 | -0.039 |
| CABZ01071909.1 | 0.306 | oaz1b | -0.036 |
| opn8c | 0.306 | elavl3 | -0.036 |
| pck1 | 0.292 | cyc1 | -0.036 |
| btbd11b | 0.290 | ywhaqb | -0.034 |
| ackr4a | 0.286 | tmsb | -0.033 |
| st3gal7 | 0.256 | alyref | -0.033 |
| si:dkey-159n16.2 | 0.245 | tmsb4x | -0.033 |
| pgbd5 | 0.232 | ywhae1 | -0.033 |
| XLOC-031372 | 0.228 | hmgb2a | -0.033 |
| LOC558761 | 0.222 | chd4b | -0.033 |
| si:ch211-198c19.3 | 0.217 | hnrnpaba | -0.032 |
| drd5a | 0.217 | tma7 | -0.032 |
| helt | 0.206 | marcksb | -0.032 |
| XLOC-010012 | 0.199 | stmn1b | -0.032 |
| opn1mw2 | 0.192 | hmgn7 | -0.031 |
| il11ra | 0.190 | atp5l | -0.031 |
| chrm2b | 0.189 | si:ch73-1a9.3 | -0.030 |
| ccka | 0.185 | serf2 | -0.030 |
| si:ch211-248a14.8 | 0.183 | cbx3a | -0.030 |
| hdr | 0.181 | zc4h2 | -0.030 |
| aqp1a.2 | 0.178 | rpl6 | -0.029 |
| npbwr2a | 0.178 | hmgb2b | -0.029 |
| cytip | 0.178 | slc25a3b | -0.029 |
| txnipb | 0.174 | atp5f1e | -0.029 |
| LO017650.1 | 0.172 | hnrnpa0b | -0.029 |
| BX323031.1 | 0.168 | h2afva | -0.029 |
| LOC110439829 | 0.167 | nucks1a | -0.029 |
| BX927336.3 | 0.165 | dbi | -0.029 |