Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| gfra3 | 0.271 | XLOC-003690 | -0.085 |
| XLOC-007078 | 0.269 | id1 | -0.082 |
| ret | 0.182 | mdka | -0.079 |
| slc18a3a | 0.162 | sox3 | -0.073 |
| si:ch211-247j9.1 | 0.145 | her15.1 | -0.072 |
| sv2c | 0.136 | notch3 | -0.069 |
| isl2a | 0.134 | XLOC-003689 | -0.068 |
| islr2 | 0.133 | cldn5a | -0.066 |
| chata | 0.133 | msi1 | -0.065 |
| cntn2 | 0.132 | hmgb2a | -0.065 |
| slc5a7a | 0.129 | btg2 | -0.064 |
| mnx1 | 0.124 | sdc4 | -0.063 |
| cplx2 | 0.118 | si:dkey-151g10.6 | -0.061 |
| onecut1 | 0.118 | XLOC-003692 | -0.061 |
| tac1 | 0.116 | cd82a | -0.061 |
| isl1 | 0.115 | her12 | -0.060 |
| elavl4 | 0.115 | sparc | -0.060 |
| l1cama | 0.115 | her4.1 | -0.060 |
| ribc1 | 0.112 | her4.2 | -0.059 |
| mnx2b | 0.110 | sox19a | -0.059 |
| stmn2b | 0.109 | COX7A2 (1 of many) | -0.057 |
| atp1a3a | 0.108 | vamp3 | -0.056 |
| syt2a | 0.108 | rplp1 | -0.056 |
| gap43 | 0.107 | sb:cb81 | -0.055 |
| gabrb4 | 0.106 | gpm6bb | -0.055 |
| xpr1a | 0.105 | sox2 | -0.055 |
| inab | 0.105 | tspan7 | -0.054 |
| chodl | 0.105 | rps23 | -0.054 |
| gjd1a | 0.104 | msna | -0.053 |
| stmn2a | 0.104 | si:ch73-281n10.2 | -0.053 |
| aclya | 0.103 | rps20 | -0.053 |
| slit3 | 0.103 | rpl35a | -0.052 |
| tmem59l | 0.102 | pgrmc1 | -0.052 |
| sncb | 0.102 | CU467822.1 | -0.051 |
| si:ch73-41e3.7 | 0.102 | zgc:165461 | -0.051 |