Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC108183801 | 0.154 | ptmab | -0.024 |
| LOC103908970 | 0.100 | ndrg4 | -0.022 |
| CR788236.1 | 0.074 | pcbp3 | -0.020 |
| plin1 | 0.070 | hmgb3a | -0.017 |
| LOC110437749 | 0.069 | scrt2 | -0.017 |
| si:ch211-194m7.8 | 0.068 | neurod4 | -0.016 |
| slco1e1 | 0.067 | si:ch73-1a9.3 | -0.016 |
| lrata | 0.063 | calb2b | -0.015 |
| selenou1b | 0.063 | zc4h2 | -0.014 |
| BX005124.2 | 0.061 | si:ch211-222l21.1 | -0.014 |
| lratb.2 | 0.061 | pcp4l1 | -0.014 |
| slc39a4 | 0.060 | sox4a | -0.014 |
| ephx1 | 0.060 | bhlhe23 | -0.014 |
| zgc:110789 | 0.060 | tmem178b | -0.014 |
| rdh5 | 0.058 | fam107b | -0.014 |
| hps1 | 0.056 | mdkb | -0.014 |
| slc16a1a | 0.056 | olfm1b | -0.014 |
| tm6sf2 | 0.055 | mpp6b | -0.013 |
| slc39a8 | 0.055 | stx3a | -0.013 |
| tm4sf18 | 0.055 | gnao1b | -0.013 |
| cidea | 0.054 | onecut2 | -0.013 |
| rgrb | 0.054 | tiam1a | -0.013 |
| fgfbp1a | 0.054 | epb41a | -0.013 |
| si:ch211-125m10.6 | 0.054 | onecut1 | -0.013 |
| shhb | 0.053 | gnb3a | -0.013 |
| sod3a | 0.053 | gpr85 | -0.012 |
| rdh20 | 0.052 | tfap2a | -0.012 |
| slc15a4 | 0.052 | mir181b-3 | -0.012 |
| rgra | 0.052 | atoh7 | -0.012 |
| si:ch211-236l14.4 | 0.052 | si:ch211-152c2.3 | -0.012 |
| slc13a4 | 0.051 | LOC101884666 | -0.011 |
| rpe65a | 0.051 | camk2d2 | -0.011 |
| rlbp1b | 0.051 | chst1 | -0.011 |
| CR361560.1 | 0.051 | fmnl2b | -0.011 |
| msnb | 0.050 | znf395b | -0.011 |