Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ccdc17 | 0.075 | mdka | -0.061 |
| FO834903.1 | 0.075 | id1 | -0.059 |
| elavl3 | 0.075 | XLOC-003690 | -0.056 |
| LOC110437750 | 0.073 | cldn5a | -0.049 |
| rtn1b | 0.071 | notch3 | -0.044 |
| myt1b | 0.071 | sox3 | -0.044 |
| LOC103909697 | 0.070 | sb:cb81 | -0.042 |
| XLOC-027708 | 0.070 | atp1a1b | -0.042 |
| CR812832.1 | 0.070 | XLOC-003689 | -0.040 |
| tmem59l | 0.069 | vamp3 | -0.040 |
| gng3 | 0.068 | gas1b | -0.040 |
| si:dkeyp-85e10.3 | 0.067 | btg2 | -0.038 |
| nsg2 | 0.067 | her12 | -0.038 |
| sncb | 0.067 | fabp7a | -0.038 |
| rtn1a | 0.067 | sox19a | -0.037 |
| vamp2 | 0.066 | fosab | -0.037 |
| phox2a | 0.066 | cd82a | -0.037 |
| XLOC-031339 | 0.065 | sdc4 | -0.036 |
| si:dkey-276j7.1 | 0.065 | her15.1 | -0.036 |
| aplp1 | 0.063 | si:dkey-151g10.6 | -0.035 |
| si:ch211-150d5.3 | 0.063 | COX7A2 (1 of many) | -0.035 |
| stxbp1a | 0.063 | gpm6bb | -0.035 |
| phox2bb | 0.063 | zfp36l1a | -0.035 |
| celf3a | 0.063 | atp1b1a | -0.035 |
| elavl4 | 0.063 | notch1b | -0.034 |
| onecut1 | 0.063 | msna | -0.034 |
| gng2 | 0.062 | phgdh | -0.034 |
| ywhah | 0.062 | her8a | -0.034 |
| thsd7aa | 0.062 | sox2 | -0.034 |
| gabrb4 | 0.061 | atp1b4 | -0.033 |
| gap43 | 0.061 | si:ch211-286b5.5 | -0.033 |
| stmn1b | 0.060 | her4.1 | -0.032 |
| atp6v0cb | 0.060 | nutf2l | -0.032 |
| csdc2a | 0.060 | hmgb2a | -0.032 |
| stx1b | 0.060 | sox19b | -0.032 |