Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxa1a | 0.448 | hmgb1a | -0.053 |
| fshr | 0.406 | thoc2 | -0.034 |
| CR931780.1 | 0.369 | rpa3 | -0.034 |
| fgf10a | 0.348 | myl12.1 | -0.033 |
| dnai1.2 | 0.319 | psma3 | -0.032 |
| ora3 | 0.314 | si:dkey-67c22.2 | -0.032 |
| XLOC-016411 | 0.301 | eif5b | -0.030 |
| LOC103910403 | 0.301 | prpf40a | -0.030 |
| avil | 0.296 | ppp1caa | -0.029 |
| acsbg1 | 0.264 | gkap1 | -0.028 |
| LOC100537963 | 0.259 | hnrnpm | -0.028 |
| sgca | 0.201 | si:rp71-45k5.4 | -0.028 |
| nr1d2a | 0.201 | pho | -0.027 |
| lamb4 | 0.196 | mphosph6 | -0.027 |
| tmem182a | 0.194 | yeats4 | -0.027 |
| si:dkey-32n7.4 | 0.194 | rps27.2 | -0.026 |
| rasl11a | 0.186 | caap1 | -0.026 |
| si:ch73-7i4.2 | 0.180 | rbm4.2 | -0.026 |
| ddhd1b | 0.179 | zgc:153867 | -0.026 |
| si:dkey-58f10.4 | 0.178 | rps2 | -0.026 |
| kcnc3b | 0.174 | tmpob | -0.026 |
| XLOC-017414 | 0.168 | cdk11b | -0.025 |
| cacna2d2b | 0.166 | pnn | -0.025 |
| pparda | 0.162 | kpna4 | -0.024 |
| alkal2b | 0.157 | nipblb | -0.024 |
| LOC100536730 | 0.151 | ptp4a2b | -0.024 |
| si:dkey-31g6.6 | 0.148 | chd4b | -0.024 |
| myh6 | 0.146 | med19a | -0.024 |
| si:ch211-232i5.3 | 0.146 | rpf1 | -0.024 |
| emb | 0.141 | gar1 | -0.024 |
| bag2 | 0.130 | CABZ01005379.1 | -0.024 |
| her9 | 0.127 | eif3s6ip | -0.024 |
| LOC103910105 | 0.125 | spint2 | -0.023 |
| si:dkeyp-66d1.7 | 0.125 | coa3a | -0.023 |
| LOC101885011 | 0.124 | ube2ib | -0.023 |