Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cd79a | 0.211 | ptmab | -0.042 |
| zgc:171452 | 0.151 | tmsb4x | -0.040 |
| ccl38.6 | 0.129 | hnrnpaba | -0.034 |
| BX293559.2 | 0.125 | marcksb | -0.034 |
| BX784029.2 | 0.123 | tubb2b | -0.033 |
| si:dkey-30j10.5 | 0.118 | hnrnpa0b | -0.031 |
| clu | 0.117 | khdrbs1a | -0.031 |
| slit1b | 0.116 | elavl3 | -0.030 |
| wu:fj39g12 | 0.114 | si:ch211-288g17.3 | -0.030 |
| shhb | 0.111 | hnrnpa0l | -0.030 |
| npr3 | 0.109 | hmgb1b | -0.029 |
| ctgfa | 0.108 | ddx39ab | -0.028 |
| myl9a | 0.105 | chd4a | -0.028 |
| wnt4b | 0.105 | hmgb3a | -0.027 |
| arxa | 0.104 | snrpd1 | -0.027 |
| kcnh4b | 0.102 | apex1 | -0.027 |
| trabd2b | 0.099 | cirbpa | -0.027 |
| spon1b | 0.098 | fabp3 | -0.027 |
| arxb | 0.098 | tmsb | -0.025 |
| BX908782.3 | 0.098 | ptmaa | -0.025 |
| fxyd1 | 0.097 | h3f3a | -0.025 |
| LOC100536609 | 0.097 | snrpf | -0.025 |
| gpc5b | 0.097 | hmgn2 | -0.025 |
| vasna | 0.096 | mex3b | -0.024 |
| cyr61l2 | 0.095 | cirbpb | -0.024 |
| sparcl1 | 0.092 | hmga1a | -0.024 |
| si:dkey-208c12.2 | 0.091 | hnrnpub | -0.024 |
| si:ch211-63b16.4 | 0.090 | tmeff1b | -0.024 |
| tbata | 0.089 | snrpd2 | -0.023 |
| scinlb | 0.087 | stmn1b | -0.023 |
| ntn1b | 0.087 | h2afvb | -0.023 |
| gpc5a | 0.086 | XLOC-003689 | -0.023 |
| slit2 | 0.086 | sumo3b | -0.023 |
| col9a2 | 0.085 | tubb5 | -0.023 |
| LOC103911277 | 0.085 | h2afva | -0.022 |