Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sycn.1 | 0.315 | hmgb2b | -0.039 |
| fhl5 | 0.198 | hsp90ab1 | -0.038 |
| fhl1a | 0.184 | setb | -0.036 |
| si:dkey-4p15.3 | 0.174 | tcf15 | -0.035 |
| sult3st2 | 0.169 | si:ch73-1a9.3 | -0.035 |
| tnni2a.1 | 0.161 | ran | -0.035 |
| myhb | 0.155 | rps12 | -0.035 |
| si:ch211-117c19.1 | 0.154 | gtpbp4 | -0.035 |
| pdlim3a | 0.150 | hmgn2 | -0.034 |
| BX248418.1 | 0.142 | snu13b | -0.033 |
| tpm4b | 0.142 | si:ch211-222l21.1 | -0.033 |
| flnca | 0.140 | npm1a | -0.033 |
| klhl41a | 0.136 | snrpd1 | -0.033 |
| tpm1 | 0.133 | ranbp1 | -0.032 |
| xirp1 | 0.124 | bzw1b | -0.032 |
| si:dkeyp-66d1.7 | 0.116 | cbx3a | -0.031 |
| si:dkey-56m15.7 | 0.115 | eif4a1a | -0.031 |
| zgc:172270 | 0.115 | snrpd2 | -0.031 |
| XLOC-023704 | 0.114 | anp32b | -0.031 |
| si:ch211-77g15.32 | 0.112 | cirbpb | -0.030 |
| LOC103908748 | 0.112 | rpl39 | -0.030 |
| smtnl1 | 0.111 | rpl32 | -0.030 |
| abhd6b | 0.110 | dkc1 | -0.030 |
| zgc:153921 | 0.110 | ddx21 | -0.030 |
| vtnb | 0.110 | rpl7 | -0.030 |
| chrng | 0.110 | nop56 | -0.030 |
| ankrd24 | 0.109 | eif3ba | -0.029 |
| pgm5 | 0.107 | eif3d | -0.029 |
| zgc:66156 | 0.107 | ptmab | -0.029 |
| pdlim3b | 0.107 | seta | -0.029 |
| alpk3b | 0.106 | naca | -0.029 |
| camk2a | 0.106 | rsl1d1 | -0.029 |
| tpm2 | 0.105 | pabpc1a | -0.029 |
| LOC100535225 | 0.103 | rps29 | -0.029 |
| pdlim5b | 0.102 | nop58 | -0.029 |