Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| kcnj11l | 0.416 | si:ch211-222l21.1 | -0.101 |
| si:busm1-57f23.1 | 0.359 | hmga1a | -0.074 |
| c7b | 0.293 | si:ch73-1a9.3 | -0.070 |
| olig1 | 0.247 | ier5 | -0.062 |
| aplnra | 0.234 | slc25a5 | -0.060 |
| tnr | 0.233 | hmgn2 | -0.060 |
| relt | 0.228 | mdka | -0.059 |
| CABZ01059119.1 | 0.226 | si:ch211-288g17.3 | -0.059 |
| ankrd33bb | 0.225 | h3f3a | -0.058 |
| ninj2 | 0.221 | hmgb2a | -0.057 |
| aplnrb | 0.221 | her12 | -0.055 |
| syt9b | 0.216 | cldn5a | -0.055 |
| gpr17 | 0.215 | cirbpb | -0.053 |
| lmo7a | 0.202 | calm2b | -0.053 |
| ugt8 | 0.198 | sox11b | -0.052 |
| sox10 | 0.198 | h2afvb | -0.052 |
| taok3a | 0.195 | sb:cb81 | -0.052 |
| itga4 | 0.193 | btg2 | -0.051 |
| LOC101884340 | 0.188 | hmgb2b | -0.051 |
| neto2a | 0.185 | pbx4 | -0.050 |
| si:ch211-132b12.8 | 0.184 | hmgb1b | -0.050 |
| zcchc24 | 0.183 | hoxc3a | -0.050 |
| sox8b | 0.180 | rps20 | -0.050 |
| vstm4b | 0.177 | hmgn6 | -0.049 |
| traf4a | 0.172 | rpl12 | -0.049 |
| myrf | 0.171 | rps19 | -0.049 |
| si:ch73-335m24.2 | 0.170 | h3f3d | -0.049 |
| caska | 0.169 | rpl13 | -0.049 |
| olig2 | 0.164 | rsl24d1 | -0.049 |
| bcan | 0.161 | hnrnpa0l | -0.048 |
| tuba8l3 | 0.161 | khdrbs1a | -0.048 |
| timd4 | 0.155 | eef1a1l1 | -0.048 |
| sema5a | 0.152 | hoxb3a | -0.048 |
| swap70b | 0.150 | ptmab | -0.048 |
| cspg4 | 0.149 | hmgb3a | -0.048 |