Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| rhol | 0.428 | hsp90ab1 | -0.092 |
| rom1b | 0.413 | hmgn2 | -0.078 |
| pde6b | 0.409 | hnrnpaba | -0.077 |
| gnat1 | 0.405 | h3f3d | -0.075 |
| saga | 0.399 | cirbpb | -0.071 |
| pde6ga | 0.395 | h2afvb | -0.070 |
| rom1a | 0.394 | nme2b.1 | -0.068 |
| pdca | 0.389 | rpl9 | -0.068 |
| cnga1b | 0.386 | khdrbs1a | -0.066 |
| pde6a | 0.386 | h3f3a | -0.065 |
| si:ch211-113d22.2 | 0.385 | fkbp1aa | -0.065 |
| sagb | 0.382 | rpl10 | -0.064 |
| rho | 0.377 | marcksl1b | -0.063 |
| gngt1 | 0.373 | tubb2b | -0.063 |
| grk1a | 0.367 | hmgb2b | -0.063 |
| guca1b | 0.361 | si:ch211-222l21.1 | -0.061 |
| cnga1a | 0.360 | hmga1a | -0.061 |
| cplx4c | 0.359 | slc25a3b | -0.060 |
| CABZ01084566.1 | 0.357 | ran | -0.060 |
| rbp2a | 0.355 | hnrnpa0l | -0.060 |
| BX004774.2 | 0.347 | rpl13 | -0.060 |
| zgc:162144 | 0.336 | hmgb1b | -0.060 |
| si:ch211-207j7.2 | 0.311 | si:ch211-288g17.3 | -0.060 |
| gucy2f | 0.309 | cfl1 | -0.059 |
| guca1a | 0.292 | hnrnpabb | -0.058 |
| unc119.2 | 0.291 | rack1 | -0.057 |
| cabp4 | 0.282 | actb1 | -0.057 |
| cngb1a | 0.258 | si:dkey-151g10.6 | -0.057 |
| zgc:77752 | 0.255 | hnrnpa0b | -0.056 |
| aanat1 | 0.252 | rps9 | -0.056 |
| LOC108180196 | 0.250 | rps23 | -0.056 |
| rgs9b | 0.242 | rplp2l | -0.055 |
| aipl1 | 0.236 | snrpf | -0.055 |
| faimb | 0.222 | rps24 | -0.055 |
| zgc:112334 | 0.213 | rps11 | -0.055 |