Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| limch1b | 0.125 | marcksb | -0.020 |
| pecam1 | 0.087 | si:ch211-288g17.3 | -0.019 |
| kdr | 0.084 | hmgb1b | -0.017 |
| myct1a | 0.083 | ddx39ab | -0.016 |
| LOC101882770 | 0.079 | tuba1a | -0.016 |
| si:ch211-145b13.6 | 0.079 | cx43.4 | -0.015 |
| si:dkeyp-97a10.2 | 0.078 | hmgb3a | -0.015 |
| clec14a | 0.077 | ilf2 | -0.015 |
| LOC108179520 | 0.077 | si:ch211-137a8.4 | -0.015 |
| flt1 | 0.076 | smarce1 | -0.015 |
| notchl | 0.076 | snrpb | -0.015 |
| si:ch73-334d15.2 | 0.075 | snrpd1 | -0.015 |
| cdh5 | 0.074 | tuba1c | -0.015 |
| she | 0.074 | apex1 | -0.014 |
| ushbp1 | 0.074 | elavl3 | -0.014 |
| tie1 | 0.074 | fabp3 | -0.014 |
| kdrl | 0.072 | hnrnpa0a | -0.014 |
| ccm2l | 0.069 | nono | -0.014 |
| myct1b | 0.068 | nucks1a | -0.014 |
| scarf1 | 0.068 | seta | -0.014 |
| ecscr | 0.068 | setb | -0.014 |
| adgrl4 | 0.067 | si:dkey-56m19.5 | -0.014 |
| thsd1 | 0.065 | snrpd2 | -0.014 |
| erg | 0.064 | snrpe | -0.014 |
| zgc:153311 | 0.064 | snrpf | -0.014 |
| igfbp7 | 0.062 | snrpg | -0.014 |
| fgd5a | 0.060 | tmeff1b | -0.014 |
| LOC101884756 | 0.060 | cbx3a | -0.013 |
| tek | 0.060 | gpm6aa | -0.013 |
| plvapb | 0.059 | h2afva | -0.013 |
| rasip1 | 0.059 | hnrnph1l | -0.013 |
| sox7 | 0.058 | hnrnpub | -0.013 |
| yrk | 0.058 | sox11b | -0.013 |
| LOC101882826 | 0.057 | ewsr1a | -0.012 |
| LOC108180727 | 0.057 | hdac1 | -0.012 |