| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lhx9 | 0.271 | XLOC-003690 | -0.142 |
| barhl2 | 0.255 | id1 | -0.135 |
| ebf3a | 0.228 | her15.1 | -0.134 |
| nrn1a | 0.227 | mdka | -0.124 |
| ralyl | 0.226 | hmgb2a | -0.123 |
| pik3r3b | 0.202 | cldn5a | -0.120 |
| stmn1b | 0.190 | XLOC-003689 | -0.120 |
| uncx | 0.180 | zgc:56493 | -0.116 |
| gng3 | 0.179 | btg2 | -0.116 |
| adcyap1b | 0.175 | sox3 | -0.114 |
| nanos1 | 0.171 | msna | -0.109 |
| rtn1b | 0.169 | eef1a1l1 | -0.108 |
| ebf1a | 0.166 | vamp3 | -0.105 |
| stmn2a | 0.161 | notch3 | -0.104 |
| mab21l2 | 0.160 | sdc4 | -0.104 |
| elavl4 | 0.160 | tspan7 | -0.103 |
| snap25a | 0.160 | actb2 | -0.103 |
| cdk5r1b | 0.158 | XLOC-003692 | -0.103 |
| nsg2 | 0.156 | COX7A2 (1 of many) | -0.102 |
| tshz2 | 0.156 | ran | -0.101 |
| zc4h2 | 0.155 | sparc | -0.099 |
| tmem59l | 0.155 | rpl12 | -0.099 |
| stx1b | 0.155 | rps2 | -0.099 |
| rbfox3b | 0.154 | her4.2 | -0.098 |
| csdc2a | 0.154 | msi1 | -0.096 |
| sncb | 0.153 | her12 | -0.095 |
| gpm6ab | 0.153 | her4.1 | -0.095 |
| sox4a | 0.151 | rpl5a | -0.094 |
| rtn1a | 0.150 | rpl23 | -0.091 |
| elavl3 | 0.150 | ccng1 | -0.090 |
| si:dkey-56f14.7 | 0.149 | si:dkey-151g10.6 | -0.089 |
| hunk | 0.148 | sox19a | -0.089 |
| gap43 | 0.148 | rplp2l | -0.089 |
| tmsb | 0.147 | sb:cb81 | -0.088 |
| olfm1b | 0.146 | cd82a | -0.088 |