Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| stm | 0.426 | krt15 | -0.225 |
| agr2 | 0.388 | krt18b | -0.220 |
| otomp | 0.358 | krt4 | -0.216 |
| slc25a22b | 0.336 | gsnb | -0.214 |
| slc4a4b | 0.332 | pvalb8 | -0.204 |
| aif1l | 0.330 | tfap2a | -0.201 |
| efhd1 | 0.326 | si:ch211-153b23.5 | -0.199 |
| cahz | 0.315 | tmsb | -0.198 |
| serpine2 | 0.310 | cldnh | -0.198 |
| sparc | 0.310 | gpc1a | -0.195 |
| mb | 0.309 | si:ch211-195b11.3 | -0.195 |
| si:ch211-80h18.1 | 0.299 | capn8 | -0.194 |
| ptprz1b | 0.298 | krt1-c5 | -0.190 |
| bricd5 | 0.296 | nqo1 | -0.190 |
| col9a2 | 0.282 | negaly6 | -0.189 |
| si:ch211-236l14.4 | 0.277 | si:ch211-103f14.3 | -0.189 |
| BX005234.1 | 0.276 | si:dkey-205h13.2 | -0.185 |
| ca9 | 0.275 | cd99 | -0.184 |
| atp1a1a.4 | 0.269 | spaca4l | -0.178 |
| otog | 0.268 | cldn8 | -0.177 |
| col9a1a | 0.267 | gsta.1 | -0.176 |
| si:ch211-133n4.4 | 0.264 | cyt1 | -0.176 |
| aldh1a3 | 0.263 | col17a1b | -0.175 |
| sox10 | 0.261 | six2b | -0.174 |
| tecta | 0.260 | oclna | -0.172 |
| col2a1a | 0.259 | wu:fb18f06 | -0.172 |
| ndrg2 | 0.257 | nkx3.2 | -0.172 |
| si:dkey-98f17.3 | 0.257 | txn | -0.168 |
| jam2b | 0.253 | icn | -0.167 |
| si:ch211-133n4.6 | 0.252 | mcama | -0.167 |
| zpld1a | 0.252 | tmem176l.4 | -0.165 |
| OTOP1 | 0.247 | anxa4 | -0.164 |
| col11a1a | 0.245 | tagln2 | -0.164 |
| pcdh7b | 0.245 | capgb | -0.164 |
| tmem47 | 0.244 | dnase1l4.1 | -0.164 |