Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| kncn | 0.149 | actc1b | -0.033 |
| or133-3 | 0.132 | rtn1a | -0.033 |
| nod1 | 0.112 | ckbb | -0.033 |
| XLOC-007977 | 0.099 | gpm6aa | -0.032 |
| FP016208.1 | 0.093 | hbbe1.3 | -0.032 |
| clic3 | 0.087 | myt1b | -0.031 |
| abcg2b | 0.080 | elavl3 | -0.031 |
| XLOC-002539 | 0.075 | pvalb1 | -0.031 |
| oxgr1a.2 | 0.072 | nova2 | -0.031 |
| LOC108179803 | 0.072 | tmsb | -0.030 |
| BX769173.2 | 0.071 | hbae3 | -0.029 |
| XLOC-021180 | 0.068 | si:dkeyp-75h12.5 | -0.029 |
| pcna | 0.067 | hbae1.1 | -0.027 |
| CR855379.3 | 0.066 | hmgb3a | -0.027 |
| LOC101883870.1 | 0.066 | tmsb4x | -0.027 |
| BX572078.1 | 0.065 | marcksl1b | -0.026 |
| zgc:110540 | 0.065 | hbbe1.1 | -0.025 |
| LOC108183327 | 0.063 | pvalb2 | -0.025 |
| dhfr | 0.063 | mylpfa | -0.025 |
| rpa2 | 0.061 | tnrc6c1 | -0.024 |
| fen1 | 0.061 | rnasekb | -0.024 |
| nasp | 0.060 | dpysl2b | -0.024 |
| slbp | 0.059 | calm1a | -0.023 |
| chaf1a | 0.059 | ndrg2 | -0.023 |
| dut | 0.059 | COX3 | -0.023 |
| lig1 | 0.057 | stxbp1a | -0.023 |
| XLOC-026004 | 0.056 | atp6v0cb | -0.023 |
| chek1 | 0.056 | cyt1l | -0.023 |
| pdzk1 | 0.056 | dpysl3 | -0.023 |
| si:ch1073-159d7.5.1 | 0.056 | CU634008.1 | -0.023 |
| rpa3 | 0.055 | myt1a | -0.022 |
| XLOC-011926 | 0.055 | ankrd12 | -0.022 |
| prim2 | 0.055 | syt2a | -0.022 |
| gig2i | 0.054 | ywhah | -0.022 |
| stmn1a | 0.053 | myhz1.1 | -0.022 |