Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx5a | 0.486 | rack1 | -0.024 |
| her1 | 0.420 | bhmt | -0.023 |
| emilin3a | 0.406 | COX5B | -0.022 |
| si:dkey-273g18.1 | 0.375 | zgc:92744 | -0.022 |
| sema3d | 0.369 | apoa2 | -0.021 |
| LOC110437888 | 0.361 | sec61g | -0.021 |
| crispld1b | 0.353 | fabp3 | -0.020 |
| LOC101883320 | 0.341 | agxtb | -0.019 |
| CABZ01076996.1 | 0.329 | gatm | -0.019 |
| fank1 | 0.303 | aqp12 | -0.019 |
| zgc:194418 | 0.285 | rbp4 | -0.019 |
| CABZ01069040.1 | 0.245 | rpl22l1 | -0.019 |
| evx2 | 0.243 | pabpc1a | -0.019 |
| c18h3orf33 | 0.235 | kng1 | -0.019 |
| snai2 | 0.231 | atp5pd | -0.019 |
| itga9 | 0.230 | zgc:123103 | -0.019 |
| snx8b | 0.228 | agxta | -0.018 |
| nog2 | 0.228 | fetub | -0.018 |
| prrx1a | 0.225 | si:dkey-16p21.8 | -0.018 |
| XLOC-033023 | 0.223 | rps18 | -0.018 |
| grin2db | 0.221 | serpina1 | -0.018 |
| tgm1l1 | 0.206 | cox8a | -0.018 |
| BX005153.2 | 0.200 | apom | -0.018 |
| kirrel1a | 0.179 | sec61b | -0.018 |
| bmp2a | 0.175 | fgg | -0.018 |
| smyd4 | 0.174 | cpn1 | -0.018 |
| lhx2b | 0.173 | LOC110437731 | -0.018 |
| ogna | 0.170 | vtnb | -0.017 |
| fgfbp2b | 0.167 | hao1 | -0.017 |
| twsg1a | 0.166 | serpina1l | -0.017 |
| sh3bp5a | 0.166 | shmt1 | -0.017 |
| CABZ01068600.1 | 0.166 | atp5fa1 | -0.017 |
| hoxa13b | 0.160 | fgb | -0.017 |
| PCMTD2 (1 of many) | 0.160 | ambp | -0.017 |
| zgc:114045 | 0.158 | grhprb | -0.017 |