Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc6a1a | 0.128 | hmgb2a | -0.072 |
| tfap2e | 0.127 | ahcy | -0.037 |
| slc32a1 | 0.124 | pcna | -0.036 |
| pax10 | 0.122 | fabp7a | -0.035 |
| celf5a | 0.115 | lbr | -0.034 |
| meis2a | 0.115 | rrm1 | -0.034 |
| tfap2c | 0.112 | stmn1a | -0.034 |
| syt1a | 0.112 | hmgb2b | -0.034 |
| gad2 | 0.109 | msi1 | -0.033 |
| LOC101886114 | 0.109 | mdka | -0.033 |
| tfap2a | 0.107 | msna | -0.032 |
| znf385c | 0.106 | mki67 | -0.032 |
| tfap2b | 0.106 | chaf1a | -0.032 |
| zmat4a | 0.102 | ccna2 | -0.032 |
| sv2a | 0.101 | dut | -0.031 |
| stxbp1a | 0.101 | ccnd1 | -0.031 |
| mir181b-3 | 0.101 | nutf2l | -0.030 |
| slc6a1b | 0.098 | tuba8l | -0.030 |
| stx1b | 0.097 | histh1l | -0.030 |
| il1fma | 0.097 | neurod4 | -0.029 |
| BX005003.1 | 0.093 | COX7A2 (1 of many) | -0.029 |
| syn2b | 0.092 | her15.1 | -0.029 |
| kcna4 | 0.091 | tuba8l4 | -0.029 |
| sncb | 0.091 | dek | -0.029 |
| nrxn2a | 0.091 | eef1da | -0.029 |
| lmo4b | 0.089 | hmga1a | -0.029 |
| cplx3b | 0.089 | banf1 | -0.029 |
| elavl4 | 0.088 | cks1b | -0.028 |
| eno2 | 0.088 | otx5 | -0.028 |
| ywhag2 | 0.088 | si:ch211-156b7.4 | -0.028 |
| gpha2 | 0.088 | zgc:110425 | -0.028 |
| fosl2 | 0.087 | tspan7 | -0.028 |
| znf385a | 0.086 | lig1 | -0.027 |
| meis2b | 0.086 | fen1 | -0.027 |
| gng3 | 0.086 | mcm6 | -0.027 |