Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hsd17b3 | 0.278 | cldnh | -0.056 |
| AL928908.3 | 0.276 | si:ch211-137a8.4 | -0.049 |
| ccl33.3 | 0.267 | txn | -0.045 |
| msx2a | 0.267 | pvalb8 | -0.043 |
| zgc:175135 | 0.236 | rbm38 | -0.043 |
| LOC110439549 | 0.236 | histh1l | -0.042 |
| fgf8a | 0.218 | BX284638.1 | -0.042 |
| ifit9 | 0.207 | gng13a | -0.042 |
| illr3 | 0.205 | ptmaa | -0.041 |
| CR352338.1 | 0.203 | arpc1a | -0.041 |
| ucn3l | 0.202 | cmpk | -0.041 |
| frem1a | 0.198 | nfasca | -0.041 |
| LOC100535496 | 0.194 | LOC100536671 | -0.040 |
| CU179643.1 | 0.185 | rtca | -0.039 |
| hesx1 | 0.177 | prox1a | -0.039 |
| si:dkey-280e8.1 | 0.174 | gstp1 | -0.039 |
| LOC110438505 | 0.174 | bdnf | -0.038 |
| nanos1 | 0.174 | tp53inp2 | -0.038 |
| fgf20b | 0.165 | itpkb | -0.038 |
| trim45 | 0.163 | uba1 | -0.038 |
| sstr5 | 0.161 | tmbim4 | -0.038 |
| unc93b1 | 0.160 | si:ch211-214c7.4 | -0.038 |
| emilin1b | 0.160 | rgs1 | -0.037 |
| prop1 | 0.158 | tuba1a | -0.037 |
| si:dkey-1m11.5 | 0.158 | vamp2 | -0.037 |
| tshr | 0.156 | tmed4 | -0.037 |
| pros1 | 0.156 | avil | -0.037 |
| si:ch73-189n23.1 | 0.155 | calm1a | -0.037 |
| p2rx7 | 0.153 | gnb3a | -0.036 |
| XLOC-043685 | 0.149 | si:dkey-25o16.4 | -0.036 |
| si:dkey-190j3.6 | 0.147 | tbx2b | -0.036 |
| BX324132.3 | 0.147 | tprg1 | -0.036 |
| tsku | 0.147 | trpm5 | -0.036 |
| gpr141 | 0.147 | calb2a | -0.036 |
| stra6 | 0.145 | foxq1a | -0.036 |