| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shha | 0.406 | elavl3 | -0.205 |
| shhb | 0.363 | rtn1a | -0.183 |
| cldni | 0.360 | stmn1b | -0.183 |
| foxq1a | 0.360 | pvalb5 | -0.177 |
| ociad2 | 0.350 | tmsb | -0.174 |
| apoeb | 0.349 | tspan2a | -0.168 |
| si:rp71-77l1.1 | 0.340 | si:ch211-153b23.5 | -0.167 |
| capgb | 0.337 | tuba1a | -0.166 |
| crip1 | 0.336 | NC-002333.4 | -0.162 |
| igfbp7 | 0.332 | adcyap1b | -0.160 |
| si:ch211-51i16.1 | 0.329 | insm1a | -0.156 |
| fgfbp1b | 0.324 | tmeff1b | -0.155 |
| artnb | 0.323 | si:dkeyp-75h12.5 | -0.155 |
| klf3 | 0.321 | zgc:65894 | -0.154 |
| nav2a | 0.320 | gnao1a | -0.153 |
| col17a1b | 0.319 | si:dkey-276j7.1 | -0.151 |
| si:ch211-25g7.5 | 0.318 | zgc:55461 | -0.151 |
| gstm.3 | 0.318 | gng3 | -0.150 |
| foxa2 | 0.317 | sncb | -0.149 |
| ccnd2a | 0.317 | atf5a | -0.149 |
| gng13a | 0.314 | fstl5 | -0.147 |
| gpc1b | 0.313 | scg2b | -0.147 |
| fgfrl1a | 0.313 | LOC100537342 | -0.147 |
| rpz5 | 0.309 | chga | -0.146 |
| zgc:153911 | 0.308 | abhd2b | -0.146 |
| zgc:163121 | 0.307 | hsbp1a | -0.143 |
| sostdc1a | 0.304 | uncx | -0.142 |
| si:ch73-199e17.1 | 0.303 | olfm1b | -0.141 |
| ca6 | 0.303 | ebf3a | -0.140 |
| rassf6 | 0.301 | si:ch211-10a23.2 | -0.135 |
| rgs1 | 0.300 | nsg2 | -0.134 |
| LOC100536671 | 0.300 | pde6d | -0.134 |
| tagln2 | 0.298 | fabp10b | -0.133 |
| ehd2b | 0.297 | nova2 | -0.133 |
| si:busm1-71b9.3 | 0.297 | mycbp | -0.133 |