| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc1a3b | 0.201 | marcksl1b | -0.117 |
| fzd5 | 0.198 | rtn1a | -0.107 |
| fezf2 | 0.196 | elavl3 | -0.107 |
| id3 | 0.188 | stmn1b | -0.106 |
| fezf1 | 0.174 | gpm6ab | -0.096 |
| nkx2.4b | 0.169 | gng3 | -0.091 |
| foxd1 | 0.165 | rtn1b | -0.087 |
| rx3 | 0.165 | sncb | -0.086 |
| hmga2 | 0.165 | zc4h2 | -0.085 |
| rgmd | 0.159 | tubb5 | -0.084 |
| eno4 | 0.159 | atp6v0cb | -0.082 |
| lrig1 | 0.159 | gpm6aa | -0.081 |
| zfp36l1a | 0.155 | si:dkey-276j7.1 | -0.081 |
| vax1 | 0.154 | elavl4 | -0.079 |
| zgc:174888 | 0.154 | vamp2 | -0.078 |
| sox1b | 0.151 | tmsb | -0.077 |
| si:dkeyp-110a12.4 | 0.149 | stx1b | -0.076 |
| nkx2.4a | 0.145 | hmgb3a | -0.076 |
| her9 | 0.145 | stmn2a | -0.075 |
| vax2 | 0.143 | stxbp1a | -0.074 |
| lix1 | 0.140 | rnasekb | -0.074 |
| zfp36l2 | 0.138 | dpysl3 | -0.074 |
| sdc4 | 0.136 | tuba1c | -0.074 |
| shha | 0.136 | mllt11 | -0.073 |
| foxd2 | 0.135 | ywhag2 | -0.073 |
| XLOC-044191 | 0.133 | gap43 | -0.072 |
| her2 | 0.132 | si:dkeyp-75h12.5 | -0.072 |
| XLOC-003690 | 0.124 | atp6v1e1b | -0.071 |
| cd82a | 0.123 | fez1 | -0.071 |
| ptch2 | 0.119 | nsg2 | -0.070 |
| ppap2d | 0.118 | zgc:65894 | -0.069 |
| fgfr2 | 0.118 | ptmaa | -0.068 |
| fosab | 0.117 | ywhah | -0.068 |
| her15.1 | 0.117 | h2afx1 | -0.068 |
| bmpr1ba | 0.116 | gng2 | -0.068 |