Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mir125a-1 | 0.367 | srsf3a | -0.028 |
| XLOC-041945 | 0.352 | sec61b | -0.028 |
| LOC103909796 | 0.332 | cdc40 | -0.027 |
| FP016247.2 | 0.319 | syncripl | -0.026 |
| LOC100331417 | 0.319 | ttf1 | -0.026 |
| cdh29 | 0.308 | hexim1 | -0.026 |
| rgs13 | 0.293 | ccnb1 | -0.025 |
| cmya5 | 0.276 | smad5 | -0.025 |
| BX324230.2 | 0.259 | ciapin1 | -0.024 |
| calhm2 | 0.259 | cpsf2 | -0.024 |
| XLOC-001601 | 0.259 | cnot2 | -0.023 |
| kcnh4a | 0.244 | apoc1 | -0.023 |
| LOC108190957 | 0.244 | cdca7a | -0.023 |
| mhc1uba | 0.219 | ubr5 | -0.023 |
| CABZ01018269.1 | 0.209 | syf2 | -0.023 |
| LOC110439420 | 0.205 | r3hcc1l | -0.022 |
| LOC101883516 | 0.201 | nusap1 | -0.022 |
| CR450780.1 | 0.175 | carm1 | -0.022 |
| gp1bb | 0.165 | ccdc77 | -0.022 |
| LOC108191726 | 0.158 | hspa5 | -0.022 |
| phyhip | 0.152 | hdgfl2 | -0.021 |
| si:dkey-61l1.4 | 0.141 | atf1 | -0.021 |
| CU929203.2 | 0.139 | tpm3 | -0.021 |
| si:ch211-254c8.3 | 0.132 | zc3h15 | -0.021 |
| cabp1b | 0.128 | LOC108190024 | -0.021 |
| plac8.1 | 0.128 | zc3h11a | -0.021 |
| itga4 | 0.127 | ddx21 | -0.021 |
| CR848812.1 | 0.127 | dock1 | -0.021 |
| XLOC-015374 | 0.127 | prpf31 | -0.020 |
| CR855860.2 | 0.127 | mrpl2 | -0.020 |
| XLOC-037556 | 0.126 | uri1 | -0.020 |
| ptprua | 0.123 | rnf114 | -0.020 |
| LOC101886078 | 0.121 | aurkaip1 | -0.020 |
| nkx1.2la | 0.121 | pbdc1 | -0.020 |
| XLOC-043980 | 0.120 | rnf19a | -0.020 |