| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| evx1 | 0.440 | XLOC-003690 | -0.107 |
| nrn1a | 0.308 | id1 | -0.105 |
| nxph3 | 0.287 | her15.1 | -0.096 |
| zgc:153395 | 0.252 | mdka | -0.092 |
| slc17a6a | 0.241 | cldn5a | -0.090 |
| lhx1a | 0.224 | msna | -0.088 |
| pdzrn4 | 0.217 | hmgb2a | -0.087 |
| slc17a6b | 0.204 | sox3 | -0.084 |
| nrxn1a | 0.191 | btg2 | -0.082 |
| mab21l2 | 0.183 | XLOC-003689 | -0.081 |
| mab21l1 | 0.177 | notch3 | -0.080 |
| lhx5 | 0.172 | vamp3 | -0.078 |
| skor1b | 0.171 | msi1 | -0.077 |
| stxbp1a | 0.159 | sdc4 | -0.077 |
| rgs6 | 0.158 | COX7A2 (1 of many) | -0.077 |
| hoxa9a | 0.156 | sparc | -0.076 |
| casz1 | 0.154 | her4.1 | -0.072 |
| stx1b | 0.148 | fosab | -0.071 |
| skor1a | 0.146 | her4.2 | -0.070 |
| nr5a2 | 0.146 | XLOC-003692 | -0.070 |
| elavl4 | 0.145 | fabp7a | -0.069 |
| cplx2 | 0.143 | cd82a | -0.069 |
| vamp2 | 0.142 | sox19a | -0.068 |
| myt1b | 0.140 | gpm6bb | -0.068 |
| chrnb4 | 0.140 | si:ch73-281n10.2 | -0.067 |
| XLOC-003084 | 0.139 | her12 | -0.066 |
| nsg2 | 0.138 | sox2 | -0.066 |
| sncb | 0.138 | sb:cb81 | -0.065 |
| zgc:162707 | 0.136 | si:ch211-286b5.5 | -0.065 |
| rtn1b | 0.136 | cd63 | -0.065 |
| cnih3 | 0.135 | tspan7 | -0.064 |
| map1aa | 0.134 | tuba8l | -0.064 |
| rbfox3a | 0.133 | atp1a1b | -0.064 |
| ywhag2 | 0.133 | lfng | -0.063 |
| stmn2a | 0.133 | selenoh | -0.062 |