| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| id1 | 0.102 | elavl3 | -0.090 |
| notch3 | 0.091 | sncb | -0.087 |
| cldn5a | 0.084 | gng3 | -0.085 |
| XLOC-003690 | 0.083 | stxbp1a | -0.085 |
| msna | 0.078 | elavl4 | -0.084 |
| sox2 | 0.078 | myt1b | -0.084 |
| sox19a | 0.076 | stmn1b | -0.084 |
| msi1 | 0.075 | stx1b | -0.081 |
| her15.1 | 0.074 | vamp2 | -0.081 |
| akap12b | 0.072 | snap25a | -0.081 |
| tuba8l | 0.072 | atp6v0cb | -0.075 |
| sox3 | 0.071 | syt2a | -0.075 |
| fosab | 0.071 | nsg2 | -0.075 |
| mdka | 0.071 | rtn1b | -0.074 |
| hmgb2a | 0.071 | cplx2 | -0.073 |
| COX7A2 (1 of many) | 0.071 | stmn2a | -0.073 |
| zfp36l1a | 0.069 | tmem59l | -0.072 |
| vamp3 | 0.068 | gng2 | -0.072 |
| btg2 | 0.067 | ywhag2 | -0.071 |
| sdc4 | 0.066 | rtn1a | -0.071 |
| wls | 0.065 | cplx2l | -0.071 |
| nrarpb | 0.065 | rbfox1 | -0.069 |
| smo | 0.064 | gap43 | -0.069 |
| gfap | 0.063 | jagn1a | -0.069 |
| col4a5 | 0.062 | ywhah | -0.068 |
| fgfr2 | 0.062 | gpm6ab | -0.068 |
| rfx4 | 0.061 | tmsb | -0.068 |
| angptl4 | 0.061 | onecut1 | -0.067 |
| hmga2 | 0.061 | zc4h2 | -0.066 |
| col4a6 | 0.061 | golga7ba | -0.066 |
| si:ch211-286b5.5 | 0.061 | sncgb | -0.066 |
| her2 | 0.060 | aplp1 | -0.065 |
| ranbp1 | 0.060 | zgc:65894 | -0.065 |
| lfng | 0.060 | id4 | -0.065 |
| zgc:56493 | 0.059 | csdc2a | -0.064 |