| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.328 | eef1a1l1 | -0.326 |
| h1m | 0.310 | ybx1 | -0.268 |
| ccna1 | 0.294 | hnrnpa0b | -0.263 |
| mkrn4 | 0.293 | si:ch211-152c2.3 | -0.261 |
| cldnd | 0.290 | si:ch211-222l21.1 | -0.254 |
| spink2.1 | 0.287 | hspb1 | -0.252 |
| h2af1al | 0.281 | rpl7a | -0.239 |
| dnajc1 | 0.277 | rps6 | -0.238 |
| acp5a | 0.275 | hmgb2a | -0.238 |
| gtf2a1 | 0.275 | hmgn2 | -0.231 |
| zgc:173742 | 0.272 | dynll1 | -0.230 |
| si:dkey-68o6.5 | 0.268 | rplp0 | -0.228 |
| blf | 0.266 | rps7 | -0.223 |
| pho | 0.262 | rplp1 | -0.220 |
| ttf1 | 0.258 | anp32e | -0.215 |
| tent4b | 0.256 | rpsa | -0.214 |
| thoc2 | 0.256 | rps5 | -0.212 |
| rcor1 | 0.254 | aldob | -0.212 |
| zgc:113424 | 0.251 | hmgn6 | -0.209 |
| lamp2 | 0.248 | polr3gla | -0.209 |
| rbm7 | 0.244 | rps19 | -0.208 |
| hyou1 | 0.243 | mt-co2 | -0.207 |
| map7d1a | 0.242 | ptmab | -0.207 |
| npc2 | 0.242 | rpl7 | -0.204 |
| zgc:100951 | 0.242 | apoeb | -0.203 |
| baz1b | 0.240 | rpl11 | -0.203 |
| stk35l | 0.240 | rps4x | -0.203 |
| nasp | 0.239 | rpl26 | -0.197 |
| si:ch73-299h12.2 | 0.231 | rps2 | -0.197 |
| gpatch4 | 0.230 | si:ch73-1a9.3 | -0.197 |
| mknk2a | 0.230 | rps20 | -0.194 |
| slc16a3 | 0.229 | rps12 | -0.189 |
| arfip1 | 0.228 | rpl19 | -0.188 |
| prpf40a | 0.227 | npm1a | -0.187 |
| maco1a | 0.227 | rps15a | -0.184 |