| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| crx | 0.402 | pax6a | -0.254 |
| otx5 | 0.371 | pax6b | -0.244 |
| ndrg1b | 0.325 | pcna | -0.189 |
| gnb3a | 0.320 | elavl3 | -0.186 |
| syt5b | 0.315 | celf2 | -0.182 |
| rs1a | 0.314 | ranbp1 | -0.180 |
| btg1 | 0.293 | mir181b-3 | -0.172 |
| neurod4 | 0.272 | mcm7 | -0.171 |
| vsx1 | 0.266 | nasp | -0.171 |
| anp32e | 0.254 | lig1 | -0.170 |
| pcp4l1 | 0.252 | sox2 | -0.169 |
| ckbb | 0.251 | mcm6 | -0.164 |
| tp53inp1 | 0.251 | tmsb4x | -0.163 |
| mpp6b | 0.245 | id1 | -0.161 |
| gng13b | 0.245 | rpa2 | -0.158 |
| scg3 | 0.242 | nap1l1 | -0.157 |
| fkbp1ab | 0.242 | banf1 | -0.157 |
| samsn1a | 0.238 | mcm2 | -0.155 |
| cspg5b | 0.238 | fen1 | -0.155 |
| atp2b1b | 0.230 | anp32b | -0.155 |
| daam1a | 0.229 | nat8l | -0.154 |
| zgc:109965 | 0.224 | mcm5 | -0.153 |
| prom1b | 0.224 | ccnd1 | -0.153 |
| bhlhe23 | 0.221 | mcm4 | -0.151 |
| gngt2a | 0.217 | rpa3 | -0.151 |
| tulp1a | 0.217 | rrm1 | -0.150 |
| smad7 | 0.216 | si:ch211-222l21.1 | -0.149 |
| neurod1 | 0.216 | cdca7a | -0.147 |
| ctbp2a | 0.213 | sub1a | -0.147 |
| eml1 | 0.211 | zgc:56493 | -0.146 |
| epb41a | 0.210 | mcm3 | -0.146 |
| opn6a | 0.209 | dkc1 | -0.146 |
| mid1ip1b | 0.207 | rbfox2 | -0.146 |
| si:ch73-28h20.1 | 0.207 | setb | -0.145 |
| tmem108 | 0.206 | syt1a | -0.144 |