| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.240 | NC-002333.4 | -0.208 |
| h1m | 0.227 | si:ch73-1a9.3 | -0.175 |
| ccna1 | 0.223 | eef1a1l1 | -0.173 |
| acp5a | 0.222 | si:ch211-222l21.1 | -0.166 |
| gtf2a1 | 0.220 | hspb1 | -0.155 |
| zgc:173742 | 0.217 | ptmab | -0.145 |
| npc2 | 0.215 | hmgb2a | -0.142 |
| cldnd | 0.213 | si:ch211-152c2.3 | -0.138 |
| blf | 0.212 | hnrnpa0b | -0.137 |
| mkrn4 | 0.210 | rplp1 | -0.136 |
| lamp2 | 0.210 | hmgn6 | -0.135 |
| rbm7 | 0.209 | dynll1 | -0.134 |
| spink2.1 | 0.209 | hmga1a | -0.132 |
| gdf3 | 0.205 | rpl7a | -0.132 |
| zgc:77118 | 0.203 | ybx1 | -0.126 |
| dnajc1 | 0.202 | add3b | -0.124 |
| cdca7a | 0.199 | sox2 | -0.123 |
| ctsba | 0.199 | hmgn2 | -0.122 |
| zgc:100951 | 0.198 | nop2 | -0.112 |
| si:dkey-68o6.5 | 0.196 | rpl27 | -0.111 |
| h2af1al | 0.196 | anp32e | -0.109 |
| dctpp1 | 0.194 | marcksl1b | -0.107 |
| rcor1 | 0.188 | rps2 | -0.104 |
| epcam | 0.187 | rpl11 | -0.104 |
| ctsla | 0.186 | rps7 | -0.104 |
| zgc:56676 | 0.185 | rps5 | -0.102 |
| pabpn1l | 0.180 | rps19 | -0.102 |
| slc16a3 | 0.178 | rps4x | -0.101 |
| nme2b.1 | 0.178 | rps12 | -0.101 |
| pfn2 | 0.177 | apoeb | -0.100 |
| ccna2 | 0.176 | rpl26 | -0.099 |
| psme3 | 0.175 | apoc1 | -0.099 |
| fdx1 | 0.174 | rpl7 | -0.097 |
| inka1a | 0.173 | pkdccb | -0.097 |
| aktip | 0.173 | rps15a | -0.097 |